|
Validation data set
|
Total number of sequences (X)
|
i-rDNA predicted 'probable 16S rDNA' sequences (Y)
|
Fold reduction in search space (X/Y)
|
meta-RNA predicted 16S rDNA sequences (A)
|
i-rDNA predicted 16S rDNA sequences within 'A' (B)
|
Detection sensitivity (B*100/A)
|
|---|
|
SimLC -Sanger
|
97493
|
9262
|
10.5
|
183
|
156
|
85.2
|
|
SimMC -Sanger
|
114456
|
10873
|
10.5
|
268
|
236
|
88.1
|
|
SimHC -Sanger
|
116770
|
10505
|
11.1
|
392
|
341
|
87.0
|
|
SimLC-454-400
|
224422
|
30663
|
7.3
|
268
|
241
|
89.9
|
|
SimMC-454-400
|
268350
|
36145
|
7.4
|
337
|
312
|
92.6
|
|
SimHC-454-400
|
267076
|
37492
|
7.1
|
452
|
407
|
90.0
|
|
SimLC-454-250
|
359076
|
53795
|
6.7
|
404
|
374
|
92.6
|
|
SimMC-454-250
|
429360
|
65498
|
6.6
|
506
|
476
|
94.1
|
|
SimHC-454-250
|
427321
|
64922
|
6.6
|
679
|
637
|
93.8
|
|
SimLC-454-100
|
897689
|
153505
|
5.8
|
845
|
776
|
91.8
|
|
SimMC-454-100
|
1073401
|
174535
|
6.2
|
1035
|
971
|
93.8
|
|
SimHC-454-100
|
1068303
|
130974
|
8.2
|
1514
|
1371
|
90.6
|
- * X = The total number of sequences in a given data set; Y = Total number of sequences predicted by the i-rDNA program as 'probable rDNA sequences' in that data set
- ** A = The total number of 16S rDNA sequences predicted by meta-rna program in the entire data set;
- B = Number of 16S rDNA sequences within the subset of 'probable r-DNA sequences' predicted by i-rDNA
