Table 1 Summary of number of PPIs in each STRING prediction approaches
From: Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets
STRING database prediction method | Number of PPIs | STRING database prediction method | Number of PPIs |
|---|---|---|---|
Neighbourhood | 12,706 | Transferred neighborhood | 78,376 |
Co-expression | 0 | Transferred co-expression | 4,393 |
Experiments | 4 | Transferred experimental | 4,129 |
Databases | 7,030 | Transferred databases | 629 |
Text mining | 2,715 | Transferred text mining | 11,074 |
Gene fusion | 2,646 | Co-occurrence | 159,213 |
All STRING database PPIs | 248,574 |