Table 1 Pairwise alignments of plasmodia GSTs with yeast GST.
From: ApicoAlign: an alignment and sequence search tool for apicomplexan proteins
EMBOSS/water program | BLOSUM62 matrix | PfFSmat60 matrix | ||
|---|---|---|---|---|
Organism | Length | Similarity (%) | Length | Similarity (%) |
P. berghei (PBANKA_102390) P. chabaudi (PCHAS_102470) P. falciparum (PF14_0187) P. knowlesi (PKH_132970) P. vivax (PVX_085515) P. yoelii (PY05088) | 200 208 206 200 200 208 | 39.50 36.50 37.40 38.50 38.00 36.50 | 247 247 248 246 250 250 | 55.90 56.30 57.30 57.70 57.60 54.80 |
FASTA program | BLOSUM50 matrix | PfFSmat60 matrix | ||
Organism | Length | E-value | Length | E-value |
P. berghei (PBANKA_102390) P. chabaudi (PCHAS_102470) P. falciparum (PF14_0187) P. knowlesi (PKH_132970) P. vivax (PVX_085515) P. yoelii (PY05088) | 71 22 22 190 166 73 | 0.05 0.15 1 0.05 0.07 0.10 | 229 229 233 231 231 231 | 3.90E-041 5.00E-039 1.80E-016 2.30E-042 1.00E-042 2.90E-037 |