Skip to main content

Table 12 Comparison with other TIS prediction tools.

From: Improvement in the prediction of the translation initiation site through balancing methods, inclusion of acquired knowledge and addition of features to sequences of mRNA

Mus musculus

 

TP

FP

TN

FN

Ac

Pr

Se

Sp

Adj

First-ATG

47

61

0

0

43.52

43.52

-

-

-

NetStart

72

21

113

15

83.71

77.42

82.76

84.33

83.54

TIS Miner

82

15

134

11

89.26

84.54

88.17

89.93

89.05

ATGpr

90

18

155

0

93.15

83.33

-

89.59

-

Our methodology

85

17

73

6

87.29

83.33

93.41

81.11

87.26

Rattus norvegicus

 

TP

FP

TN

FN

Ac

Pr

Se

Sp

Adj

First-ATG

97

30

0

0

76.38

90.65

-

-

-

NetStart

52

33

64

42

66.49

61.18

55.32

65.98

60.6

TIS Miner

53

73

75

1

63.36

42.40

98.15

50.67

74.71

ATGpr

100

27

78

0

86.83

78.74

-

74.28

-

Our methodology

32

34

52

0

71.19

48.48

-

60.46

-

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us