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Table 3 List of small RNAs that are O2-responsive in at least one of the two phytopathogens D. dadantii and P. atrosepticum

From: Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

ASAP Feature ID Gene Name Fold Change    References
D. dadantii P. atrosepticum E. coli   D. dadantii P. atrosepticum E. coli  
ABF-0061315 ABL-0064934   arcZ 1.9 -1.2*   [115]
ABF-0061324 ABL-0061410 ABE-0001579 ffs 12.8 4.3 1.4* [116118]
ABF-0174125 ABL-0064933   fnrS 28.3 52.4   [113, 114]
ABF-0061309 ABL-0064917   glmY 3 1.4*   [119123]
ABF-0061313 ABL-0064935   glmZ -0.8* 1.9*   [119123]
ABF-0061316 ABL-0060542 ABE-0010269 rnpB 2.7 1.2* 1.6* [12]
ABF-0061322 ABL-0061263   rsmB 3.7 1.2*   [124126]
ABF-0061325 ABL-0062736   ryeA 2.3 -2.1   [127, 128]
ABF-0061326 ABL-0062735   ryeB 5.4 -2.3   [127, 128]
ABF-0061311 ABL-0063956   rygA 6.3 -2.0*   [129, 130]
ABF-0061314 ABL-0060225 ABE-0012621 spf 16.3 -1.1* 2.08* [131]
ABF-0061318 ABL-0060877   sraF 0.6* -3   [132]
ABF-0061317 ABL-0060677 ABE-0009556 ssrS 5.2 2 1.75* [133]
ABF-0061323 ABL-0061273   tff -1.8 -1.1*   [134]
  1. This list of small RNA genes are differentially expressed in one or both phytopathogens. Where there is a gene in E. coli in the group, the fold change is included. Statistically insignificant values are marked with an asterisk.