Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

Table 3 List of small RNAs that are O₂-responsive in at least one of the two phytopathogens D. dadantii and P. atrosepticum

ASAP Feature ID			Gene Name	Fold Change			References
D. dadantii	P. atrosepticum	E. coli		D. dadantii	P. atrosepticum	E. coli
ABF-0061315	ABL-0064934		arcZ	1.9	-1.2*		[115]
ABF-0061324	ABL-0061410	ABE-0001579	ffs	12.8	4.3	1.4*	[116–118]
ABF-0174125	ABL-0064933		fnrS	28.3	52.4		[113, 114]
ABF-0061309	ABL-0064917		glmY	3	1.4*		[119–123]
ABF-0061313	ABL-0064935		glmZ	-0.8*	1.9*		[119–123]
ABF-0061316	ABL-0060542	ABE-0010269	rnpB	2.7	1.2*	1.6*	[12]
ABF-0061322	ABL-0061263		rsmB	3.7	1.2*		[124–126]
ABF-0061325	ABL-0062736		ryeA	2.3	-2.1		[127, 128]
ABF-0061326	ABL-0062735		ryeB	5.4	-2.3		[127, 128]
ABF-0061311	ABL-0063956		rygA	6.3	-2.0*		[129, 130]
ABF-0061314	ABL-0060225	ABE-0012621	spf	16.3	-1.1*	2.08*	[131]
ABF-0061318	ABL-0060877		sraF	0.6*	-3		[132]
ABF-0061317	ABL-0060677	ABE-0009556	ssrS	5.2	2	1.75*	[133]
ABF-0061323	ABL-0061273		tff	-1.8	-1.1*		[134]

This list of small RNA genes are differentially expressed in one or both phytopathogens. Where there is a gene in E. coli in the group, the fold change is included. Statistically insignificant values are marked with an asterisk.

ISSN: 1471-2164