Table 3 List of orthologous conserved miRNAs with nucleotide divergence between Amur grape and 'Summer Black' grape (hybrid of V. vinifera and V. labrusca)
MiRNA | Amur grape | Summer Black grape |
|---|---|---|
MiR159a/b | CCTTGGAGTGAAGGGAGCT | TTGGAGTGAAGGGAGCTCTC |
MiR167a | TGAAGCTGCCAGCATGATCT | TGAAGCTGCCAGCATGATCTG |
MiR169e | TAGCCAAGGATGACTTGCCT | TAGCCAAGGATGACTTGCCTGC |
MiR169u | TGAGTCAAGGATGACTTGCCG | TGAGTCAAGGATGACTTGCCGT |
MiR319b | TTGGACTGAAGGGAGCTCCCT | TTGGACTGAAGGGAGCTCCC |
MiR319c/f | TGCTTGGACTGAAGGGAG | TTGGACTGAAGGGAGCTCCC |
MiR393a | TCCAAAGGGATCGCATTGAT | TTCCAAAGGGATCGCATTGAT |
MiR397a/b | TCATTGAGTGCAGCGTTGATG | CATTGAGTGCAGCGTTGATGA |
MiR398a | TTCTCAGGTCACCCCTTTGGG | TGTGTTCTCAGGTCACCCCTT |
MiR399a | CAAAGGAGAATTGCCCTGTTA | TGCCAAAGGAGAATTGCC |
MiR399b/c | TGCCAAAGGAGAGTTGCCCTG | GCCAAAGGAGAGTTGCCCT |
MiR399d | AAAGGAGATTTGCTCGTGAAT | TCTGCCAAAGGAGATTTGCTC |
MiR399i | CGCCAAAGGAGAGTTGCCCTG | CGCCAAAGGAGAGTTGCCC |