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Table 1 Genetic diversity parameters for all loci without null allele (WONA; 506).

From: SNP mining in C. clementina BAC end sequences; transferability in the Citrus genus (Rutaceae), phylogenetic inferences and perspectives for genetic mapping

 

% L. P.

MLGs

Ho

He

F

C. maxima (10)

26.88

10

0.063+/-0.012

0.063+/-0.011

 

C. medica (5)

15.42

5

0.089+/-0.021

0.057+/-0.012

 

C. reticulata (12)

90.71

12

0.327+/-0.019

0.279+/-0.013

 

C. aurantifolia (4)

54.55

4

0.217+/-0.021

0.186+/-0.015

 

C. aurantium (2)

54.74

1

0.547+/-0.043

0.273+/-0.021

 

C. limon (7)

68.97

7

0.364+/-0.030

0.267+/-0.017

 

C. paradisi (2)

41.70

2

0.416+/-0.042

0.208+/-0.021

 

C.sinensis (4)

65.61

4

0.653+/-0.041

0.327+/-0.020

 

Wild Citrus (5)

47.23

5

0.118+/-0.012

0.150+/-0.013

 

All samples (54)

100.00

53

0.278+/-0.010

0.336+/-0.011

0.127+/-0.019

  1. %LP: percentage of polymorphic loci, MLGs: number of multilocus genotypes differentiated; Ho: observed heterozygosity; He: Nei diversity; F: Wright fixation index