SNP mining in C. clementina BAC end sequences; transferability in the Citrus genus (Rutaceae), phylogenetic inferences and perspectives for genetic mapping

Table 6 Mappable loci for comparative genetic mapping.

	Clem	C. max.	C. med.	C. ret.	C. arf	C. aur.	C. lim.	C. par.	C. sin.	C. mic.
Clementine	567	36	13	67	51	13	58	6	26	2
C. maxima	136	189	9	40	27	15	37	5	18	2
C. medica	73	28	99	16	17	5	16	3	4	1
C. reticulata	444	122	73	554	63	17	76	9	26	2
C. aurantifolia	271	78	52	264	377	15	63	8	21	2
C. aurantium	264	64	47	260	207	295	15	5	11	2
C. limon	350	88	63	350	263	256	460	9	23	2
C. paradisis	192	57	38	193	142	139	171	221	7	1
C. sinensis	321	101	49	301	216	208	269	192	361	2
C. micrantha	14	6	6	15	13	11	13	10	10	17
Total WONA	476	141	79	461	295	277	375	211	332	15
Total WNA	91	48	20	93	82	18	85	10	29	2

Above the diagonal, loci with null alleles (WNA) polymorphic within each species; below the diagonal, loci without null alleles (WONA) polymorphic within each species; diagonal in bold, total number of loci mappable in one species (both WNA and WONA).

ISSN: 1471-2164