Table 1 General features of sugarcane LTR-RT lineages
Superfamily/Lineage | Size (kb) | LTR (bp) | Families | Sequences |
|---|---|---|---|---|
Copia | Â | Â | Â | Â |
Ale | 4.7-5.9 | 116-238 | 5 | 8 |
Angela | 6.5-8.5 | 434-461 | 3 | 3 |
Ivana | 5-5.9 | 238-454 | 6 | 8 |
Maximus | 10.2-13.6 | 1607-2004 | 4 | 13 |
Total Copia | Â | Â | 18 | 32 |
Gypsy | Â | Â | Â | Â |
DEL | 11.3-16.7 | 2762-5139 | 6 | 12 |
Reina | 5.1-5.7 | 315-416 | 4 | 4 |
TAT | 9.2-17.7 | 458-1345 | 7 | 12 |
Total Gypsy | Â | Â | 17 | 28 |
Overall Total | Â | Â | 35 | 60 |