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Table 1 Capture efficiency

From: Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples

  Low calving interval pool High calving interval pool
Total sequencing data generated (Gb) 1.57 1.38
Sequence data mapped to bovine genome (Gb) 1.23 (78%) 0.9 (67%)
Data mapped to targeted regions (Mb) 143 (12%) 132 (14%)
Data remaining after quality control (Mb) 74 (52%) 48 (34%)
Number of bases targeted (Mb) 1.54 1.54
Quantity of bases covered (Mb) 1.18 (76%) 1.20 (77%)
Average fold coverage per base 56 32
  1. Percentages in parentheses represent proportions related to the category above each field.