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Table 2 Variants detected across the 1.5Mb of targeted sequence

From: Polymorphism discovery and allele frequency estimation using high-throughput DNA sequencing of target-enriched pooled DNA samples

  Shared between pools Unique in Low CIV pool2 Unique to High CIV pool2
  SNP Indel SNP Indel SNP Indel
5' and 3' UTR 547 86 93 50 118 58
Exonic1 278 (153) 29 57 (38) 17 65 (45) 19
Intronic 2226 277 310 189 441 168
  1. 1: Numbers in parenthesis represent the number of SNPs resulting in non synonymous substitutions; 2: Variants classified as unique represent variants undetected in the corresponding pool.