Table 6 Effects of SNPs located in the 5' UTR of SLC2A1, HK1 and ESR2 on predicted miRNA binding sites.
Entrez Gene ID/Ensembl ID | Chromosome | Position | Allele | Strand | miRNA name | miRNA sequence | Free energy ΔG1 (kcal/mol) |
|---|---|---|---|---|---|---|---|
| Â | Â | Â | T | (+) | bta-miR-10b | uacccuguagaaccgaauuugug | -20.7 |
SLC2A1 | 3 | 110250920 | Â | Â | bta-miR-136 | acuccauuuguuuugaugaugga | -22.0 |
| Â | Â | Â | G | (+) | bta-miR-1249 | acgcccuucccccccuucuuca | -21.5 |
| Â | Â | Â | Â | Â | bta-miR-2284r | uuggcccaaaaguucguucggau | -21.3 |
HK1 | 28 | 24994609 | T | (+) | bta-miR-2465 | ugagccacaguagagccuuggau | -21.9 |
ESR2 | 10 | 78593544 | A | (-) | bta-miR-2348 | uucgggugguguggagcggcc | -21.9 |