Table 1 Previously unpublished primer sets mapped in the interspecific Allium cepa x A. roylei population
From: AlliumMap-A comparative genomics resource for cultivated Allium vegetables
Primer Set | Genbank Accession | FORWARD PRIMER | REVERSE PRIMER |
|---|---|---|---|
ACABE58 | CF447676 | TCTTCGAGAACTATCCCGACAT | ACTCAACCGCTGTTACAAGGAT |
ACI017 | AY585678 | CCGACTACATGTAAGTTGCATTAAC | TCTTGCATAATTTCACTGCACA |
ACM005 | BI095610 | CGCTTCAGCAGTGAGTTGTT | TGTTGTCCGATACAGAGTTGCT |
ACM021 | CF448154 | AAAACCCTCAACATCTCACTCC | TCTCTTCTTCCTCGTCCTGC |
ACM037 | CF438925 | GACCGACTCCAAAGCCATA | CTCTCCCGTTCTCAAAATGC |
ACM049 | CF447728 | TAACGACATCCCTACCGC | GCTTCTTCTTCCACTTTCGG |
ACM050 | CF447828 | GGTTCTCTGTTTGGGACA | CCGTTTCGGCTACCTTGTAT |
ACM052 | CF441811 | CAGCAGCAACAAAGAATGC | CTGGGGAGAATGAGAAGCAC |
ACM053 | CF437211 | CTGGGCTCTTTTGTTCATCC | ATGGTGGAGGTATGTGAGGG |
ACM058 | CF435771 | GGAGTCACACAACAGAAACACAA | AAGAAGGAATAGAGATGTAGCCGA |
ACM060 | CF435985 | ATCAGCAGCCTTCCCAGTAA | ATCACACCCGCAAAAGAAT |
ACM065 | CF449328 | GCTCTGATGGAGGATGGTTC | CTTGCCATCTTTGTCGGT |
ACM072 | CF441584 | TGAATTCAGGCCAAACATGA | GAGGAAAGCCTGAAGAGTAGCA |
ACM076 | CF449018 | ATTAGAAACATCCATCGCCG | CGCGATCATCATTTTCCATA |
ACM080 | CF449761 | GCATTATGCAGTAACGGGCT | GCAGCAGCATTTGATTGAAC |
ACM081 | CF447998 | CTGAAAAGAAACCCGCAGAG | TCAGGATGCACTTGCTTCAG |
ACM082 | CF436620 | CACCGTTCCTCAGCTCACTT | AGAGGGACGAAATGAAAGCA |
ACM092 | CF451134 | GTGATTTGAAGCCACCACCT | TGAATGGTGGTTATTCGGGT |
ACM096 | CF446191 | TGTGGGCAATTCACGTTATG | AAAAGTTGTGAACGGCATCC |
ACM105 | CF441894 | CAAGTGGAGCGGGTATTTGT | GAGGCACAACTTCCTCTTCG |
ACM107 | CF449837 | CCTTCATTCCCAAAGCACAT | GCGATAAAGAGGGACAGCAG |
ACM114 | CF436720 | TAAGTTTTGCCTCCACCACC | GCTCCACTTCAAGGCTGTTT |
ACM129 | CF442903 | CTAGGTTTCCGTGCTCCAAG | CAGTTGGAGATCAACAGGCA |
ACM140 | CF442000 | TTGAAGCTATTCTCCGCAGC | AGGGGGTCATTGATCCTAGC |
ACM144 | CF441789 | GCAACGGTAGAAGAACCTGC | AACCTCTTTTGGTGCCTCCT |
ACM149 | CF440830 | GAAGATGGGTTTGAGTGGGA | CAAGCCTGCCCTTACTCTTG |
ACM174 | CF451831 | TGCCCAATTATCGTTTCCAT | GATGAGGCGAGTTTAGAGCG |
ACM183 | CF443106 | GATGATGGTGATGGCATTGA | GTTTGCAGGCTCCATTGATT |
ACM231 | CF441488 | AAAGCTTCTACCCTGGCGAT | TCCCTACGAACTCGTCATCC |
ACM238 | CF443464 | TGATAGCCAGTTGATTGCGA | TTCCCCAGTACACACCTTCC |
ACM240 | CF444554 | GTGCAACTCCAAGAGAAGGG | AATATAAAGGCGTTGGCCTG |
ACM245 | CF445289 | GGATCTGATCGGAGATTGGA | GCGCACCTCTCTGCTAGACT |
ACM255 | CF449065 | AAATTCCCAAAACGAAACCC | GGGTTTCAGGAACAGTCAGC |
ACM295 | CF445600 | AGATCCGTCCCATGAAACT | GATCCGCTTCTGAAATCTCG |
ACM304 | DQ273270 | GAATTTAGGCCCATTTCAAGG | TGATTTGCCTAATGTTTTTACG |
ACM322 | ES449660 | TTCTTCTCCTATCCAGCTATCG | GTGATTTGGGAGGGGATTTT |
ACM340 | CF437547 | AAGTCTGGTGGTTGGTCCAG | GGTGCCCAAGAAGTTGGTTA |
ACP002 | AA451591 | AAGCTTCTTTCGATCCTTTGTG | GCTTCGATTCCATTTCAAGTTC |
ACP003 | BE205590 | AAGCTCTTAAAGCTGCTGATGG | ATGCACGATAGCACAAGACATC |
ACP034 | BQ580357 | CAGTCTTGTGGTCATTGGTCA | AACCCATGCGTATTTGAAGG |
ACP052 | CF445805 | TTCCCTCCTCACTCCCTACA | CGACCACAAACACAAGCAAC |
APSR | AF212155 | CAGCTGCAGACTTTTCCTAC | CCACGTGATCGAGTAGATCGT |
GGCS | AF401621 | CTGGAGTCACACCTGCAGAG | TCGCCTTCGGAACTGTTATT |
GGT | AF401622 | TGTTGCTACCGATGATGGTC | ATGCAACCCTGCAATTTCTC |
SPS3'UTR | EU164758 | AAAGGGAGATACAGACCAT | ATTATACATCTCATCATGTCACT |
SUCS | CF440928 | TTTGAAGTGTGGCCTTACCTTGAG | TGATGAAGTCTGTTCGATCATGGC |