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Table 2 Transcription factors association with gene data set

From: The dependence of expression of NF-κB-dependent genes: statistics and evolutionary conservation of control sequences in the promoter and in the 3′ UTR

Rank Matrix Transcription factor Combined Corrected
p-value p-value
1 NFKB_Q6_01 Nf-κb1 , Nf-κb2 6. × 10-18 3.57 × 10-15
2 NFKAPPAB65_01 Rela 7.31 × 10-17 2.02 × 10-14
3 CREL_01 C-rel 1.21 × 10-16 2.24 × 10-14
4 NFKAPPAB_01 Rela 1.68 × 10-16 2.32 × 10-14
5 NFKB_C N/A 7.56 × 10-14 8.37 × 10-12
6 NFKB_Q6 N/A 1.44 × 10-13 1.33 × 10-11
7 NFKAPPAB50_01 N/A 5.08 × 10-9 4.02 × 10-7
8 WHN_B Foxn1 2.15 × 10-7 1.49 × 10-5
9 DEAF1_01 Deaf-1 8.96 × 10-6 5.52 × 10-4
10 SP1_Q2_01 Sp1 , Sp2 1.61 × 10-5 8.91 × 10-4
  1. TRAP results for TFs associated with input set of human promoter sequences. TRAP settings: background model: human promoters. p-Values for the individual sequences are combined using Fisher’s method. For multiple test correction Benjamini-Hochberg (BH) method was chosen. Matrix names correspond to the TRANSFAC database.