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Figure 6 | BMC Genomics

Figure 6

From: Comparison of Atlantic salmon individuals with different outcomes of cardiomyopathy syndrome (CMS)

Figure 6

Gene expression of selected markers of late pathology. Real-time qPCR expression of four genes identified as pathology markers from microarrays in an extended number of individuals eight weeks post-infection. Gene abbreviations are; tnf-11b: tumor necrosis factor receptor superfamily member 11b, cd274: programmed cell death ligand 1, gzmA: granzyme A, tnf-d: tumor necrosis factor decoy receptor. The gene expression ratios are shown as boxplots based on nine HR fish (red) and ten LR fish (green) against the average of control fish. Values of the fish used in the microarray experiments are highlighted with dots and colored according to their histopathology score level (see Figure 1). Boxes represent 50% of the values, while black bars mark the median log-ER. Whiskers indicate the maximum length of 1.5 times the box length. Significance levels between all HR and LR fish are indicated on top of the plot (t-test on log-transformed values, ** = p < 0.01).

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