Table 4 Key genes 1 related to breast muscle development or lipid metabolism in two breeds of chickens
Breed | Symbol | Gene | Coefficient | Regulation | Trait |
|---|---|---|---|---|---|
AA | BMP2K | BMP-2-inducible protein kinase | −0.97 | - | Breast muscle |
CAPNS1 | Calpain, small subunit 1 | 1.00 | + | ||
GDF3 | Growth differentiation factor 3 | 1.00 | + | ||
CH25H | Cholesterol 25-hydroxylase | 0.92 | + | PLIP | |
HMGCLL1 | 3-hydroxymethyl-3-methylglutaryl- Coenzyme A lyase-like 1 | 0.97 or 0.97 | + | TG or IMF | |
NACA | Nascent polypeptide-associated complex alpha subunit | −1.00 | - | PLIP | |
RBP7 | Retinol binding protein 7 | −0.95 | - | PLIP | |
RCJMB04 _10b24 | membrane bound O-acyltransferase domain containing | 1.00 | + | PLIP | |
RCJMB04 _13o20 | NSFL1 (p97) cofactor (p47) | 1.00 | + | PLIP | |
SGPL1 | Sphingosine-1-phosphate lyase 1 | −1.00 or −1.00 | - | TG or IMF | |
SH3PXD2B | SH3 and PX domains 2B | −0.95 or −0.96 | - | TG or IMF | |
SNX3 | Sorting nexin 3 | 0.96 | + | PLIP | |
THBS1 | Thrombospondin-1 | 1.00 or 1.00 | + | TG or IMF | |
THRSP | Thyroid hormone responsive, SPOT14 homolog | −0.86 or −0.85 | - | TG or IMF | |
UCP3 | Uncoupling protein 3 | 1.00 or 1.00 | + | TG or IMF | |
BJY | ANKRD1 | Ankyrin repeat domain 1 | 0.94 | + | Breast muscle |
CENPF | Centromere protein F | −0.77 | - | ||
ELN | Elastin | −0.92 | - | ||
FGF7 | Fibroblast growth factor 7 | −0.99 | - | ||
FGFR1 | Fibroblast growth factor receptor 1 | −0.98 | - | ||
PLG | Plasminogen | 0.96 | + | ||
MYBL2 | V-myb myeloblastosis viral oncogene homolog (avian)-like 2 | −0.97 | - | ||
MYCN | V-myc myelocytomatosis viral related oncogene, neuroblastoma derived | −0.94 | - | ||
YWHAH | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein | 0.99 | + | PLIP | |
NR3C2 | Nuclear receptor subfamily 3, group C, member 2 | 0.95 | + | PLIP | |
LOC416618 | NAD(P) dependent steroid dehydrogenase-like | −0.74 | - | PLIP | |
EHHADH | Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase | 0.90 or 0.85 | + | TG or IMF | |
ETFDH | Electron-transferring-flavoprotein dehydrogenase | −0.95 | - | PLIP | |
AA/BJY 2 | MYBPC1 | Myosin binding protein C, slow type | 0.96/0.96 | + | Breast muscle |
CETP | Cholesteryl ester transfer protein | 0.98/0.80 | + | PLIP | |
GLTPD1 | Glycolipid transfer protein domain containing 1 | −1.00/-0.96 | - | PLIP | |
SNX4 | Sorting nexin 4 | 0.95/1.00 or 0.94/0.90 | + | TG or IMF |