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Table 8 Pair-wise comparisons of Phi correlations of probe ratios greater than 2 between GenomiPhi and REPLI-g amplified samples

From: Characterization of whole genome amplified (WGA) DNA for use in genotyping assay development

Sample

Phi correlation value

Amp-G/UnAmp

Replicate 1

Replicate 2

Replicate 3

Replicate 4

Normal

Replicate 1

0.746

0.724

0.782

0.725

Amp-R/UnAmp

Replicate 2

0.729

0.712

0.783

0.706

Replicate 3

0.688

0.664

0.751

0.653

Replicate 4

0.814

0.772

0.811

0.763

CF1

Replicate 1

0.736

0.804

0.906

0.681

Amp-R/UnAmp

Replicate 2

0.842

0.782

0.711

0.807

Replicate 3

0.828

0.804

0.815

0.738

Replicate 4

0.733

0.692

0.622

0.796

CF2

Replicate 1

0.762

0.771

0.833

0.835

Amp-R/UnAmp

Replicate 2

0.776

0.773

0.831

0.818

Replicate 3

0.789

0.839

0.782

0.795

Replicate 4

0.736

0.741

0.825

0.828

  1. The median values for Normal, CF1, and CF2 groups were 0.738, 0.789, and 0.792, respectively.