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Table 2 Percentage identity of the predicted protein sequences of the carotenoid metabolic genes (expressed relative to the Vitis vinifera orthologue)

From: The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.

  Accession number1
Percentage identity2 relative to the Vitis vinifera orthologue
GENE Vitis vinifera Arabidopsis thaliana Populus trichocarpa Oryza sativa
VvBCH1 VV02G00220 100% AT4G25700 66.24% PT00G07815 66.67% OS03G03370 68.04%
VvECH1 VV08G13950 100% AT3G53130 76.68% PT00G01240 80.33% OS10G39930 69.91%
VvLBCY2 VV08G15130 100% AT3G10230 79.49% PT16G03200 89.09% OS02G09750 69.67%
VvLBCY1 VV00G44920 100% No orthologue PT09G01040 76.91% No orthologue
VvLECY1 VV11G01840 100% AT5G57030 76.13% PT06G09650 84.16% OS01G39960 68.68%
VvNCED3 VV19G09570 100% AT3G14440 71.64% PT11G07980 79.39% OS03G44380 64.43%
VvPDS1 VV09G00040 100% AT4G14210 81.66% PT14G09510 84.74% OS03G08570 77.15%
VvPSY1 VV00G37410 100% AT5G17230 71.14% PT00G07390 87.32% OS06G51290 68.78%
VvVDE1 VV00G14320 100% AT1G08550 66.02% PT13G04830 86.75% OS04G31040
VvZDS1 VV14G05860 100% AT3G04870 82.72% PT00G12105 89.62% OS07G10490 80.10%
VvZEP1 VV07G11310 100% AT5G67030 71.41% PT05G05140 72.73% OS04G37619 69.30%
  1. 1 Accession from Plaza 1.0 (April 2009): http://bioinformatics.psb.ugent.be/plaza_v1/.
  2. 2 Percentage identity calculated by pairwise alignments of protein sequences using Jalview.