The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression

Table 1 Summary of TSS types and categorisations.

TSS type	ORFs	tRNAs	rRNAs	Known & predicted sRNAs	New candidate sRNAs	Candidate asRNAs	Other candidate ncRNAs
P	1940	38	7	83	47	68	152
S	428	2	7	16	5	1	1
I	95	0	0	0	0	1	1
P,I	114	0	0	0	5	208	32
S,I	14	0	0	0	3	5	0
P,Alt	28	0	0	0	0	0	0
S,Alt	2	0	0	0	0	0	0
P,Alt,I	1	0	0	1	0	0	0
S,Alt,I	1	0	0	0	0	0	0
Total	2623	40	14	100	60	283	186

Compiled from additional file 2: Tables S1, S2, S3, S4 and S5. P, S, I and Alt refer to primary, secondary, internal and ppGpp-dependent TSSs respectively. Data for SLP1-3 plasmids not shown.

ISSN: 1471-2164