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Table 2 ppGpp-dependent transcriptional start sites within the S.Typhimurium genome

From: The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression

TSSs type

% ppGpp-repressed

% ppGpp activated

Total TSSs

ORF P

29

5

1993

ORF P, I

31

4

116

ORF S

26

7

442

ORF S, I

21

0

14

ORF S, I, Alt

33

0

3

ORF I

21

8

98

Known & predicted sRNAs

7

11

100

New candidate sRNAS

12

11

65

asRNAs

11

11

302

Other ncRNAs

11

8

190

tRNAs

0

40

40

rRNAs

100

0

14

  1. Compiled from additional file 2: Tables S1, S3, S4, S5 & S6.