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Table 5 GO terms enriched in orthologs, which are only differentially expressed in P. pacificus

From: Divergent gene expression in the conserved dauer stage of the nematodes Pristionchus pacificus and Caenorhabditis elegans

GO:BP terms enriched in orthologs differentially expressed exclusively in P. pacificus
GO.ID Term Annotated Significant Expected p-Value
GO:0006898 receptor-mediated endocytosis 433 231 192.89 6.30E-05
GO:0009792 embryo development ending in birth or egg hatching 1535 740 683.81 0.00015
GO:0002119 nematode larval development 1123 549 500.27 0.00034
GO:0040020 regulation of meiosis 45 30 20.05 0.00219
GO:0042127 regulation of cell proliferation 45 30 20.05 0.00219
GO:0006412 translation 165 93 73.5 0.00691
GO:0016246 RNA interference 63 38 28.07 0.00812
GO:0055114 oxidation-reduction process 219 115 97.56 0.00912
GO:0000003 reproduction 1235 585 550.17 0.00934
GO:0040007 growth 1481 694 659.75 0.01358
GO:0009396 folic acid-containing compound biosynthetic process 5 5 2.23 0.01749
GO:0009067 aspartate family amino acid biosynthesis 10 8 4.45 0.02546
GO:0009072 aromatic amino acid family metabolic process 10 8 4.45 0.02546
GO:0006732 coenzyme metabolic process 41 27 18.26 0.0326
GO:0051603 proteolysis involved in cellularprotein catabolic process 36 24 16.04 0.03319
GO:0006396 RNA processing 72 40 32.07 0.03822
GO:0006511 ubiquitin-dependent protein catabolic process 29 18 12.92 0.04326
GO:0006418 tRNA aminoacylation for protein translation 33 20 14.7 0.04611
GO:0015684 ferrous iron transport 9 7 4.01 0.04679
GO:0042026 protein refolding 9 7 4.01 0.04679
GO:0006399 tRNA metabolic process 51 32 22.72 0.04805
GO:MF terms enriched in orthologs differentially expressed exclusively in P. pacificus
GO.ID Term Annotated Significant Expected p-Value
GO:0004298 threonine-type endopeptidase activity 13 12 5.76 4.30E-04
GO:0003899 DNA-directed RNA polymerase activity 22 17 9.74 0.00168
GO:0016491 oxidoreductase activity 283 149 125.32 0.00192
GO:0008026 ATP-dependent helicase activity 49 32 21.7 0.00229
GO:0050662 coenzyme binding 83 48 36.76 0.00828
GO:0003735 structural constituent of ribosome 93 53 41.18 0.00847
GO:0008168 methyltransferase activity 67 39 29.67 0.01438
GO:0016884 carbon-nitrogen ligase activity; with glutamine as amido-N-donor 10 8 4.43 0.02443
GO:0051082 unfolded protein binding 28 18 12.4 0.02591
GO:0030170 pyridoxal phosphate binding 34 21 15.06 0.02977
GO:0004812 aminoacyl-tRNA ligase activity 34 21 15.06 0.02977
GO:0003993 acid phosphatase activity 12 9 5.31 0.03154
GO:0031072 heat shock protein binding 23 15 10.19 0.03483
GO:0004190 aspartic-type endopeptidase activity 9 7 3.99 0.04517
GO:0015093 ferrous iron transmembrane transporter activity 9 7 3.99 0.04517
GO:0008483 transaminase activity 9 7 3.99 0.04517