Table 5 GO terms enriched in orthologs, which are only differentially expressed in P. pacificus
GO:BP terms enriched in orthologs differentially expressed exclusively in P. pacificus | |||||
|---|---|---|---|---|---|
GO.ID | Term | Annotated | Significant | Expected | p-Value |
GO:0006898 | receptor-mediated endocytosis | 433 | 231 | 192.89 | 6.30E-05 |
GO:0009792 | embryo development ending in birth or egg hatching | 1535 | 740 | 683.81 | 0.00015 |
GO:0002119 | nematode larval development | 1123 | 549 | 500.27 | 0.00034 |
GO:0040020 | regulation of meiosis | 45 | 30 | 20.05 | 0.00219 |
GO:0042127 | regulation of cell proliferation | 45 | 30 | 20.05 | 0.00219 |
GO:0006412 | translation | 165 | 93 | 73.5 | 0.00691 |
GO:0016246 | RNA interference | 63 | 38 | 28.07 | 0.00812 |
GO:0055114 | oxidation-reduction process | 219 | 115 | 97.56 | 0.00912 |
GO:0000003 | reproduction | 1235 | 585 | 550.17 | 0.00934 |
GO:0040007 | growth | 1481 | 694 | 659.75 | 0.01358 |
GO:0009396 | folic acid-containing compound biosynthetic process | 5 | 5 | 2.23 | 0.01749 |
GO:0009067 | aspartate family amino acid biosynthesis | 10 | 8 | 4.45 | 0.02546 |
GO:0009072 | aromatic amino acid family metabolic process | 10 | 8 | 4.45 | 0.02546 |
GO:0006732 | coenzyme metabolic process | 41 | 27 | 18.26 | 0.0326 |
GO:0051603 | proteolysis involved in cellularprotein catabolic process | 36 | 24 | 16.04 | 0.03319 |
GO:0006396 | RNA processing | 72 | 40 | 32.07 | 0.03822 |
GO:0006511 | ubiquitin-dependent protein catabolic process | 29 | 18 | 12.92 | 0.04326 |
GO:0006418 | tRNA aminoacylation for protein translation | 33 | 20 | 14.7 | 0.04611 |
GO:0015684 | ferrous iron transport | 9 | 7 | 4.01 | 0.04679 |
GO:0042026 | protein refolding | 9 | 7 | 4.01 | 0.04679 |
GO:0006399 | tRNA metabolic process | 51 | 32 | 22.72 | 0.04805 |
GO:MF terms enriched in orthologs differentially expressed exclusively in P. pacificus | |||||
GO.ID | Term | Annotated | Significant | Expected | p-Value |
GO:0004298 | threonine-type endopeptidase activity | 13 | 12 | 5.76 | 4.30E-04 |
GO:0003899 | DNA-directed RNA polymerase activity | 22 | 17 | 9.74 | 0.00168 |
GO:0016491 | oxidoreductase activity | 283 | 149 | 125.32 | 0.00192 |
GO:0008026 | ATP-dependent helicase activity | 49 | 32 | 21.7 | 0.00229 |
GO:0050662 | coenzyme binding | 83 | 48 | 36.76 | 0.00828 |
GO:0003735 | structural constituent of ribosome | 93 | 53 | 41.18 | 0.00847 |
GO:0008168 | methyltransferase activity | 67 | 39 | 29.67 | 0.01438 |
GO:0016884 | carbon-nitrogen ligase activity; with glutamine as amido-N-donor | 10 | 8 | 4.43 | 0.02443 |
GO:0051082 | unfolded protein binding | 28 | 18 | 12.4 | 0.02591 |
GO:0030170 | pyridoxal phosphate binding | 34 | 21 | 15.06 | 0.02977 |
GO:0004812 | aminoacyl-tRNA ligase activity | 34 | 21 | 15.06 | 0.02977 |
GO:0003993 | acid phosphatase activity | 12 | 9 | 5.31 | 0.03154 |
GO:0031072 | heat shock protein binding | 23 | 15 | 10.19 | 0.03483 |
GO:0004190 | aspartic-type endopeptidase activity | 9 | 7 | 3.99 | 0.04517 |
GO:0015093 | ferrous iron transmembrane transporter activity | 9 | 7 | 3.99 | 0.04517 |
GO:0008483 | transaminase activity | 9 | 7 | 3.99 | 0.04517 |