Table 1 Summary statistics of assembled contigs (with depth of ≥10 reads) and SNPs
| Â | Â | Â | Total | Protein-coding transcript | Non-coding transcript |
|---|---|---|---|---|---|
Contigs (with length of 100 bp or longer) |  |  | |||
| Â | Number of cocntigs | 4552 | 2146 | 2406 | |
| Â | Â | Mean length (bp) | 811 | 977 | 664 |
| Â | Â | Mean depth | 28 | 36 | 21 |
| Â | Number of SNPs | 2980 | 1744 | 1236 | |
| Â | Â | Number of transitions | 1917 | 1139 | 778 |
| Â | Â | Number of transversions | 1063 | 605 | 458 |
Contigs (with length of 501 bp or longer) |  |  | |||
| Â | Number of contigs | 3181 | 1762 | 1419 | |
| Â | Â | Mean length (bp) | 1003 | 1095 | 889 |
| Â | Â | Mean depth | 32 | 39 | 23 |
| Â | Number of SNPs | 2515 | 1555 | 960 | |
| Â | Â | Number of transitions | 1603 | 1009 | 594 |
| Â | Â | Number of transversions | 912 | 546 | 366 |