Table 2 Phakopsora pachyrhizi EST clones displaying similarity (BLASTX, E value <5e-05) to proteins in the NCBI non-redundant protein database, grouped into functional categories using the Munich Information Center of Protein Sequences (MIPS) Functional Catalogue
From: Gene expression and proteomic analysis of the formation of Phakopsora pachyrhizi appressoria
Clone/contig | Accession No. | Description | Species | E value |
|---|---|---|---|---|
01. Metabolism | ||||
Pp3070 | EGG05957 | family 1 Carbohydrate esterase | Melampsora larici-populina | 5.00E-9 |
Pp3292 | EFP76188 | FLU1-II (Glutamine synthetase) | Puccinia graminis f. sp. tritici | 8.00e-56 |
Pp3391 | XP_001833926 | Palmitoyltransferase AKR1 | Coprinopsis cinerea okayama | 9.00E-141 |
Pp3684 | XP_571450 | Hydroxymethylglutaryl- CoA | Cryptococcus neoformans var. | 3.00E-65 |
| Â | Â | reductase (NADPH) | neoformans | Â |
Pp3741 | EGG05960 | family 4 carbohydrate esterase | M. larici-populina | 8.00E-14 |
Pp3942 | EFP86206 | mannosyl phosphorylinositol | P. graminis f. sp. tritici | 1.00E-128 |
| Â | Â | ceramide synthase SUR1 | Â | Â |
10. Cell cycle and DNA processing | ||||
Pp3291 | XP_001834782 | DNA replication complex | C. cinerea okayama | 1.00E-08 |
| Â | Â | GINS protein | Â | Â |
Pp3495 | EGD98306 | G2/M phase checkpoint control | Trichophyton tonsurans | 6.00E-26 |
| Â | Â | protein SUM2 | Â | Â |
Pp3590 | EFP88202 | DNA repair protein RAD51 | P. graminis f. sp. tritici | 3.00E-161 |
Pp3976 | XP_003195178 | Chromatin remodeling-related | Cryptococcus gattii | 3.00E-45 |
| Â | Â | protein | Â | Â |
14. Protein Fate (folding, modification, destination) | ||||
Pp3243 | XP_001838238 | Prefoldin subunit 5 | C. cinerea okayama | 3.00E-26 |
Pp3282 | XP_567169 | Ubiquitin-protein ligase | C. neoformans var. neoformans | 2.00E-26 |
20. Cellular transport, transport facilitation and transport routes | ||||
Pp3060 | XP_001883758 | Cytoplasmic dynein intermediate | Laccaria bicolor | 2.00E-128 |
| Â | Â | chain | Â | Â |
Pp3772 | XP_571408 | Membrane transporter | C. neoformans var. neoformans | 3.00E-20 |
30. Cellular communication/signal transduction mechanism | ||||
Pp3004 | XP_571731 | Serine/threonine-protein | C. neoformans var. neoformans | 0.00 |
| Â | Â | kinase orb6 | Â | Â |
Pp3435 | EFP87863 | Inositol hexakisphosphate kinase 2 | P. graminis f. sp. tritici | 8.00E-96 |
32. Cell Rescue, Defense and Virulence | ||||
contig2C | XP_003192457 | Heat shock transcription factor 2 | C. gattii | 1.00E-19 |
38. Transposable elements | ||||
Pp3508 | ABI34274 | IS10 transposase, putative | Solanum lycopersicum | 0.00 |
99. Unclassified | ||||
Pp3161 | EGG09840 | hypothetical protein | M. larici-populina | 6.00E-96 |
Pp3267 | EFP87812 | hypothetical protein | P. graminis f. sp. tritici | 1.00E-6 |
Pp3464 | EFP91488 | hypothetical protein | P. graminis f. sp. tritici | 1.00E-19 |
Pp3502 | XP_569331 | hypothetical protein | M. larici-populina | 4.00E-115 |
Pp3505 | XP_002396863 | hypothetical protein | M. larici-populina | 7.00E-37 |
Pp3853 | EGG01299 | hypothetical protein | M. larici-populina | 5.00E-25 |
Pp3884 | EFP87187 | hypothetical protein | P. graminis f. sp. tritici | 1.00E-24 |
contig2bb | EFP88656 | hypothetical protein | P. graminis f. sp. tritici | 3.00E-73 |