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Table 4 Statistical comparison of called methylated genic features between tissues.

From: Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

  Male catkin Female catkin Leaf Root Xylem Phloem Bud
Male catkin 2,095/4,837 0.028 0.013 0.006 0.021 0.0081 0.0066
Female catkin 0.070 3,397/2,346 0.018 0.024 0.013 0.014 0.069
Leaf 0.021 0.0049 3,106/1,726 0.16 0.036 0.13 0.079
Root 0.023 0.0075 0.050 3,965/2,031 0.029 0.11 0.094
Xylem 0.026 0.0045 0.028 0.031 1,940/1,431 0.10 0.048
Phloem 0.011 0.0039 0.084 0.11 0.071 2,473/1,505 0.065
Bud 0.0043 0.037 0.035 0.053 0.023 0.031 3,642/1,718
  1. Sets of significantly methylated gene-associated features compared among tissues determined by the RPKM method. Gene counts per tissue are shown on the diagonal as: number with significantly methylated promoter/number with significantly methylated gene body. Proportions of these sets shared by pairs of tissues is shown, with promoter commonalities above the diagonal and gene body commonalities below the diagonal.