Table 3 43 Variable genes found within a clonal lineage of Salmonella Montevideo.

lig

STM2427

SEEM020_00085

C/T

T

1974

b

DNA ligase, NAD-dependent

perM

STM2493

SEEM020_00410

C/T

A

1034

d,e,f

permease PerM

aroB

STM3486

SEEM020_01090

C/T

V/A

488

b,c,d,e,f

shikimate kinase I

yrfI

STM3498

SEEM020_01145

C/T

T/I

353

b,c,d,e,f

heat shock protein

gntK

STM3542

SEEM020_01330

G/A

H/Q

93

a1

1) gluconate transporter GntU, 2) shikimate kinase

dppA

STM3630

SEEM020_01925

C/T

H

282

a1

dipeptide transport protein

tolB

STM0748

SEEM020_01960

G/T

A/S

64

a1

tolB protein precursor

citG

STM0619

SEEM020_04239

C/T

R/C

181

b,c,d,e,f

triphosphoribosyl-dephospho-CoA synthase

citF

STM0621

SEEM020_04249

C/T

V/A

602

b,c,d,e,f

citrate lyase alpha chain

ydfZ

STM1509

SEEM020_04749

G/A

P

174

b

putative selenium-binding protein YdfZ

STM1546

SEEM020_04939

C/T

L

1473

d,e,f

1) putative multidrug efflux protein, 2) hypothetical protein

SeSA_A1664

SEEM020_05139

C/T

L

667

a1

LysR substrate binding domain protein

STM1627

SEEM020_05529

C/T

T

543

a1

alcohol dehydrogenase class III

STM1628

SEEM020_05534

T/G

L/R

155

a1

putative cytoplasmic protein

STM1671

SEEM020_05759

A/C

V

122

a1

putative regulatory protein

STM1856

SEEM020_06993

G/T

E/Stop

316

putative cytoplasmic protein

fliC

STM1959

SEEM020_07518

T/A

N/K

723

a1

phase 1 flagellin

uhpA

STM3790

SEEM020_08264

A/G

l

60

a1

1) sensor histidine kinase UhpB, 2)transcriptional regulatory protein UhpA

nuoL

STM2318

SEEM020_09061

C/T

F

291

f2

NADH dehydrogenase I

STM4534

SEEM020_10120

C/T

A/V

14

b

putative transcriptional regulator

ytfG

STM4401

SEEM020_10825

C/T

S/F

503

f3

conserved hypothetical protein

yjeM

STM4345

SEEM020_11085

C/T

L

1179

a1

putative APC family amino-acid transport protein

STM4261

SEEM020_11575

G/A

V/I

4684

putative inner membrane protein

araD

STM0101

SEEM020_12590

C/A

Q/K

466

b

L-ribulose-5-phosphate 4-epimerase

araB

STM0103

SEEM020_12600

G/A

L

702

e,f

L-ribulokinase

STM3260

SEEM020_13557

G/A

V/M

70

b

PTS family galactitol-specific enzyme IIC

SeD_A3648

SEEM020_13697

A/G

D/G

263

d,e,f

hypothetical protein

pduV

STM2056

SEEM020_14356

G/A

D/G

353

b,c,d,e,f

propanediol utilization protein

orf408

STM1382

SEEM020_15066

G/A

T/A

1096

a1

putative regulatory protein, deoR family

ydiA

STM1348

SEEM020_15231

C/T

F

126

b,c,d,e,f

putative inner membrane protein

envE

STM1242

SEEM020_15746

T/C

I/T

446

a1

EnvE

ycfX

STM1220

SEEM020_15941

C/T

G

24

d,e,f

N-acetylglucosamine kinase

STM4097

SEEM020_16375

G/A

S/N

119

a1

putative outer membrane lipoprotein

uvrD

STM3951

SEEM020_17067

G/A

G/E

2111

f2

DNA helicase II

STM2404

SEEM020_17529

G/T

A/S

394

b

putative chloride channel permease

recB

STM2994

SEEM020_17950

G/A

S/G

901

d,e,f

exodeoxyribonuclease V

stdB

STM3028

SEEM020_18130

C/T

L

2433

f2

putative outer membrane usher protein

yqjI

STM3215

SEEM020_19095

C/A

H/N

562

e,f

1) transcriptional regulator (PadR), 2) family methyl-accepting chemotaxis protein II

ybhK

STM0801

SEEM020_19330

G/A

L

618

a1

conserved hypothetical protein

STM0818

SEEM020_19410

G/T

A/S

277

e,f

1) putative ABC-type multidrug transport system, 2) membrane permease predicted cation efflux pump

yliD

STM0851

SEEM020_19565

T/C

W/R

760

putative ABC transporter inner membrane component

invE

STM2897

SEEM020_21151

C/G

L/V

757

f

invasion protein

yejM

STM2228

SEEM020_21392

G/A

A/E

395

a1

putative hydrolase of alkaline phosphatase superfamily