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Table 2 Pectinolytic glycoside hydrolases, polysaccharide lyases and carbohydrate esterases of the 12 fungal species used in this study

From: Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin

CAZy family

S. sclerotiorum

B. fuckeliana

A. nidulans

A. clavatus

A. oryzae

A. niger

M. orysae

P. anserina

T. virens

G. zeae

P. chrysosporium

R. oryzae

GH2 LAC

1

1

3

0

1

0

3

3

1

3

0

0

GH28 (Total)

16

18

10

2

20

21

3

0

6

6

3

18

- PGA

6

9

3

1

5

7

1

0

2

2

1

15

- PGX

2

2

3

1

2

5

1

0

2

3

1

3

- RHG

4

4

1

0

6

6

1

0

0

1

1

0

- RGX

3

2

2

0

5

2

0

0

2

0

0

0

- XGH

1

1

1

0

2

1

0

0

0

0

0

0

GH35 LAC

4

4

4

3

7

5

0

1

1

3

3

1

GH43 (Total)*

4

5

15

13

20

11

20

10

3

17

4

2

- ABF

0

0

3

0

3

0

6

2

0

0

0

0

- ABN

1

1

4

5

5

4

1

0

0

1

1

2

GH78 RHA

4

8

9

0

8

8

3

1

3

7

0

0

GH88

0

1

3

0

3

1

1

0

3

1

1

0

GH93 ABX

1

1

2

1

3

1

1

3

1

2

0

0

GH105 URGH

1

1

4

3

2

2

3

0

1

3

0

0

GH51 ABF

2

3

3

3

3

4

3

1

0

2

2

0

GH53 GAL

2

2

1

0

1

1

1

1

0

1

1

0

GH54 ABF

1

1

1

1

1

1

1

0

2

1

0

0

GH127 ABF

0

1

1

1

0

0

0

0

0

1

0

0

PL1 PEL, PLY

4

6

9

2

12

7

2

4

0

9

0

0

PL3 PLY

0

2

5

1

3

0

1

2

0

7

0

0

PL4 RGL

0

0

4

2

4

2

1

1

0

3

0

0

PL9 PLY

0

0

1

0

1

0

0

0

0

1

0

0

CE8 PME

5

5

3

7

5

3

1

1

2

6

0

6

CE12 RGAE

3

3

2

1

4

2

3

1

0

3

0

0

  1. * Total refers to all the GH43 including the activities not directly involved in pectin degradation such as β-xylosidase or exo-b-1,3-galactanase. Additional file 2.