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Table 1 Association between GSTM1 and bladder cancer

From: Genome-wide CNV analysis replicates the association between GSTM1 deletion and bladder cancer: a support for using continuous measurement from SNP-array data

 

Controls

Cases

  

Data

N

average (std) of LRR

N

average (std) of LRR

OR [95%CI]

p-value

rs12068997 (110,032,359)

756

−0.0091 (0.1066)

767

−0.0223 (0.1086)

0.30 [0.11-0.82]

0.0190

rs4147567 (110,034,047)

757

−0.0138 (0.2810)

767

−0.0642 (0.2661)

0.51 [0.35-0.76]

8.47 × 10-4

rs1056806 (110,034,670)

757

−0.0031 (0.1105)

767

−0.0096 (0.1061)

0.67 [0.25-1.80]

0.4279

rs12562055 (110,034,988)

756

−0.0001 (0.1266)

767

−0.0069 (0.1244)

0.83 [0.36-1.95]

0.6754

rs2239892 (110,035,809)

757

−0.0216 (0.2099)

767

−0.0474 (0.2043)

0.51 [0.30-0.85]

0.0103

CNVtools

756

 

767

 

0.66

1.74 × 10-3

TaqMan

757

 

767

 

0.74 [0.62-0.87]

3.40 × 10-4

MLPA

757

 

767

 

0.72 [0.61-0.85]

1.15 × 10-4

  1. The association was performed by logistic regression models adjusted for age, gender, region and smoking status.