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Table 1 List of 31 genes selected as a radiosensitivity signature from four microarray platforms

From: Identification of a radiosensitivity signature using integrative metaanalysis of published microarray data for NCI-60 cancer cells

Symbol

Description

Location

Expression in radiosensitive cell

ACTN1

actinin, alpha 1

Cytoplasm

Down (0.42)

ANXA2

annexin A2

Plasma Membrane

Down (0.36)

ANXA5

annexin A5

Plasma Membrane

Down (0.42)

ARHGDIB

Rho GDP dissociation inhibitor (GDI) beta

Cytoplasm

Up (−0.49)

CAPNS1

calpain, small subunit 1

Cytoplasm

Down (0.48)

CBR1

carbonyl reductase 1

Cytoplasm

Down (0.41)

CCND1

cyclin D1

Nucleus

Down (0.54)

CD63

CD63 molecule

Plasma Membrane

Down (0.51)

CORO1A

coronin, actin binding protein, 1A

Cytoplasm

Up (−0.46)

CXCR4

chemokine (C-X-C motif) receptor 4

Plasma Membrane

Up (−0.46)

DAG1

dystroglycan 1 (dystrophin-associated glycoprotein 1)

Plasma Membrane

Down (0.60)

EMP2

epithelial membrane protein 2

Plasma Membrane

Down (0.41)

HCLS1

hematopoietic cell-specific Lyn substrate 1

Nucleus

Up (−0.58)

HTRA1

HtrA serine peptidase 1

Extracellular Space

Down (0.52)

ITGB5

integrin, beta 5

Plasma Membrane

Down (0.47)

LAPTM5

lysosomal protein transmembrane 5

Plasma Membrane

Up (−0.50)

LRMP

lymphoid-restricted membrane protein

Cytoplasm

Up (−0.49)

MYB

v-myb myeloblastosis viral oncogene homolog (avian)

Nucleus

Up (−0.59)

PFN2

profilin 2

Cytoplasm

Down (0.61)

PIR

pirin (iron-binding nuclear protein)

Nucleus

Down (0.43)

PKM2

pyruvate kinase, muscle

Cytoplasm

Down (0.44)

PTMS

parathymosin

Nucleus

Down (0.48)

PTPRC

protein tyrosine phosphatase, receptor type, C

Plasma Membrane

Up (−0.55)

PTPRCAP

protein tyrosine phosphatase, receptor type, C-associated protein

Plasma Membrane

Up (−0.49)

PYGB

phosphorylase, glycogen; brain

unknown

Down (0.35)

RAB13

RAB13, member RAS oncogene family

Plasma Membrane

Down (0.43)

RALB

v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)

  
  

Cytoplasm

Down (0.47)

SCRN1

secernin 1

Cytoplasm

Down (0.40)

SQSTM1

sequestosome 1

Cytoplasm

Down (0.48)

TWF1

twinfilin, actin-binding protein, homolog 1 (Drosophila)

Cytoplasm

Down (0.43)

WAS

Wiskott-Aldrich syndrome (eczema-thrombocytopenia)

Cytoplasm

Up (−0.60)

  1. “Down” refers to decreased expression observed in radiosensitive cells relative to radioresistant cells, determined as the slope of the correlation coefficient. “Up” refers to increased expression in radiosensitive cells.