Table 1 RosR regulon with arCOG data (archaeal Clusters of Orthologous Groups)
ORF | Gene alias | arCOG ID | Category | Protein function |
|---|---|---|---|---|
VNG0144H | VNG0144H | arCOG02761 | S | Uncharacterized conserved protein |
VNG0255C | VNG0255C | arCOG02942 | L | Ribonuclease HI |
VNG0256H | VNG0256H | arCOG04769 | S | Uncharacterized conserved protein |
VNG0439C | VNG0439C | arCOG00570 | C | Dehydrogenase (flavoprotein) |
VNG0485H | VNG0485H | arCOG09222 | S | Uncharacterized conserved protein |
VNG0486G | hat1 | arCOG00842 | J | Acetyltransferase, RimL family |
VNG0487H | VNG0487H | arCOG00842 | J | Acetyltransferase, RimL family |
VNG0488H | VNG0488H | arCOG04770 | I | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II |
VNG0506H | VNG0506H | arCOG09224 | S | Uncharacterized conserved protein |
VNG0556G | sgb | arCOG02209 | R | Polysaccharide biosynthesis protein, Mvin family |
VNG0777G | taqD | arCOG01222 | M | Cytidylyltransferase fused to conserved domain of DUF357 family |
VNG0778C | VNG0778C | arCOG01139 | R | Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
VNG1041H | VNG1041H | Â | NA | NA |
VNG1201G | fucA | arCOG04226 | G | Fuculose-1-phosphate aldolase |
VNG1202C | VNG1202C | arCOG02291 | R | HAD superfamily hydrolase |
VNG1204G | gdhA2 | arCOG01352 | E | Glutamate dehydrogenase/leucine dehydrogenase |
VNG1246H | VNG1246H | arCOG04608 | S | Uncharacterized conserved protein |
VNG1330H | VNG1330H | arCOG07569 | S | Uncharacterized conserved protein |
VNG1332G | sod2 | arCOG04147 | P | Superoxide dismutase |
VNG1343C | VNG1343C | arCOG04303 | R | Uncharacterized Rossmann fold enzyme |
VNG1404G | trh1 | arCOG02815 | K, O | Putative transcripion factor, Lrp family (K). Conserved domain frequently associated with peptide methionine sulfoxide reductase (O). |
VNG1425H | VNG1425H | arCOG04789 | S | Uncharacterized conserved protein |
VNG1444G | hisD | arCOG04352 | E | Histidinol dehydrogenase |
VNG1474G | est | arCOG01648 | R | Alpha/beta superfamily hydrolase |
VNG1533H | VNG1533H | arCOG06229 | S | Uncharacterized conserved protein |
VNG1589C | VNG1589C | arCOG09277 | S | Uncharacterized conserved protein |
VNG1749G | gbp1 | arCOG00357 | J | Predicted GTPase, probable translation factor |
VNG1948H | VNG1948H | arCOG04525 | S | Uncharacterized conserved protein |
VNG1963H | VNG1963H | Â | NA | NA |
VNG2184G | tfbA | arCOG01981 | K | Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
VNG2286G | mamA | arCOG01710 | I | Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
VNG2288G | mamB | arCOG06231 | E | Glutamate mutase epsilon subunit |
VNG2289G | mal | arCOG06232 | E | Methylaspartate ammonia-lyase |
VNG2290G | maoC1 | arCOG00775 | I | Acyl dehydratase |
VNG2291G | cat | arCOG06124 | C | Acetyl-CoA hydrolase |
VNG2376H | VNG2376H | arCOG04728 | S | Uncharacterized conserved protein |
VNG2444C | VNG2444C | arCOG01141 | R | Phosphoesterase |
VNG2556H | VNG2556H | arCOG09321 | S | Uncharacterized conserved protein |
VNG2570G | dcd | arCOG04048 | F | Deoxycytidine deaminase |
VNG2591C | VNG2591C | arCOG02264 | S | Predicted membrane protein |
VNG2593H | VNG2593H | arCOG03026 | O | Thioredoxin-like protein |
VNG2594C | VNG2594C | arCOG09323 | S | Uncharacterized conserved protein |
VNG2669G | cyo | arCOG04471 | S | Predicted membrane protein |
VNG5143C | VNG5143C | arCOG09333 | R | Predicted permease |
VNG5157H | VNG5157H | Â | NA | NA |
VNG5164C | VNG5164C | arCOG04311 | R | Predicted hydrolase of HD superfamily |
VNG6275H | VNG6275H | Â | NA | NA |
VNG6276H | VNG6276H | arCOG09354 | S | Uncharacterized conserved protein |
VNG6312G | argS | arCOG00487 | J | Arginyl-tRNA synthetase |
VNG6313G | nhaC3 | arCOG02010 | C | Na+/H + antiporter |