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Table 1 Difference in genes coding protein between normal-type and Ogura-type

From: A complete mitochondrial genome sequence of Ogura-type male-sterile cytoplasm and its comparative analysis with that of normal cytoplasm in radish (Raphanus sativus L.)

Gene

Nucleic acid

Amino acidb

nad4

1010 T-C

Non-synonymous (337 L-P)

cox1

117 G-T

Synonymous

atp6

no homology in 5′ terminal

 

atp8

370 A-C

Non-synonymous (124 I-L)

 

444 T-C

Non-synonymous (150 V-A)

atp9

65 A-G

Non-synonymous (22 I-V)

rpL2

840 C-T

Synonymous

rpL16

492 G-A

Synonymous

rps4

776 C-T

Non-synonymous (259 S-F)

ccmC

351 G-A

Synonymous

ccmFC

605 A-G

Non-synonymous(202 E-G)

 

606 G-T

orfX

no homology in 3′ terminal

 
  1. a Location of SNP (Normal-Ogura).
  2. b Location of amino acid mutation (Normal-Ogura).