From: Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms
BES
No of BESs
No of BESs with SNPs
Total SNPs
Number of contigs with SNPs
Predicted true SNP rate(a)
Genic
29,223
6,317
8,237
629
87.1%
Non-genic
19,438
3,996
5,202
601
90.0%
Total
48,661
10,313
13,439
677
88.2%