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Table 2 Gene contents of CNVRs on Btau_4.0 and UMD3.1

From: Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array

 

Cattle RefSeq

in silico mapped human RefSeq

Ensembl genes

Glean genes

Btau_4.0

    

#genes

935 (836)

5,549 (3,146)

1,890 (1,788)

2,536 (2,408)

#overlapped CNVR

703 (21%)

1,507 (45%)

1,116 (33%)

1,330 (40%)

UMD3.1

    

#genes

1,062 (939)

6,497 (3,828)

1,964 (1,855)

ND

#overlapped CNVR

817 (24%)

1,533 (45%)

1,165 (34%)

ND

  1. Numbers in parentheses for #genes are the number of unique nonredundent gene counts, as one gene could show up multiple times in different CNVRs. Numbers in parentheses for #overlapped CNVR are the percentages of overlapped CNVR in the total CNVRs. ND: Glean genes on UMD3.1 were not determined.