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Table 1 Genomic features of Macrococcus caseolyticus and 28 Staphylococcus strains.

From: Comparative genomic analysis of the genus Staphylococcus including Staphylococcus aureus and its newly described sister species Staphylococcus simiae

Organism Size (bp) %G + C S No.CDS No.MCL
Macrococcus caseolyticus JCSC5402 2219737 36.6 1.27 2052 1688
Staphylococcus aureus COL 2813862 32.8 1.58 2615 2304
Staphylococcus aureus ED133 2832478 32.9 1.55 2653 2291
Staphylococcus aureus ED98 2847542 32.8 1.56 2689 2338
Staphylococcus aureus JH1 2936936 32.9 1.40 2780 2389
Staphylococcus aureus JH9 2937129 32.9 1.40 2726 2389
Staphylococcus aureus MRSA252 2902619 32.8 1.57 2650 2353
Staphylococcus aureus MSSA476 2820454 32.8 1.57 2590 2330
Staphylococcus aureus Mu3 2880168 32.9 1.54 2690 2368
Staphylococcus aureus Mu50 2903636 32.8 1.54 2730 2389
Staphylococcus aureus MW2 2820462 32.8 1.58 2624 2319
Staphylococcus aureus N315 2839469 32.8 1.55 2614 2307
Staphylococcus aureus NCTC_8325 2821361 32.9 1.56 2891 2347
Staphylococcus aureus Newman 2878897 32.9 1.54 2614 2338
Staphylococcus aureus RF122 2742531 32.8 1.55 2509 2267
Staphylococcus aureus USA300_FPR3757 2917469 32.7 1.58 2604 2385
Staphylococcus aureus USA300_TCH1516 2903081 32.7 1.56 2689 2382
Staphylococcus capitis SK14 2435835 32.8 1.47 2230 1847
Staphylococcus caprae C87 2473608 32.6 1.46 2402 1887
Staphylococcus carnosus TM300 2566424 34.6 1.42 2461 1859
Staphylococcus epidermidis ATCC_12228 2564615 32.0 1.12 2482 1972
Staphylococcus epidermidis RP62A 2643840 32.1 1.15 2525 2068
Staphylococcus haemolyticus JCSC1435 2697861 32.8 1.42 2692 2021
Staphylococcus hominis SK119 2226236 31.3 1.53 2182 1729
Staphylococcus lugdunensis HKU09-01 2658366 33.9 1.26 2490 1896
Staphylococcus pseudintermedius HKU10-03 2617381 37.5 1.50 2450 1910
Staphylococcus saprophyticus ATCC_15305 2577899 33.2 1.34 2514 1838
Staphylococcus simiae CCM_7213 2587121 31.9 1.33 2592 1950
Staphylococcus warneri L37603 2425653 32.8 1.42 2381 1875
  1. %G + C = 100 × (G + C)/(A + T + G + C).
  2. S = Selected codon usage bias.
  3. No.CDS = Number of protein-coding sequences.
  4. No.MCL = Number of protein families built by BLAST and Markov clustering.