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Table 4 Frequency and repeat type of SSRs in A. duranensis and A. stenosperma transcripts

From: Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection

SSR mining A. duranensis A. stenosperma Total
Total sequences analyzed 13,132 8,480 21,612
Total sequences with repeats 1,701 1,183 2,884
Total primers designed 1,463 862 2,324
SSR in repeat types    
Di-nucleotide 157 115 272
Tri-nucleotide 838 488 1,326
Tetra,Penta-nucleotide 315 161 476
Hexa-nucleotide 153 98 251
SSR polymorphism    
Amplified in other parent* 376 208 584
Polymorphic § 142 72 214
Percentage of polymorphic primers - - 36.6
  1. * SSRs identified in one parent also amplified in the other parent.
  2. § Polymorphic SSRs identified from the set of primers amplifying in both species.