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Table 2 Performance of different models for 309 TF-TFBSs (with PWM information)

From: Towards biological characters of interactions between transcription factors and their DNA targets in mammals

 

Control Model

Sequence Model

Structure Model

Evolution Model

Hybrid Model

 

Mean

SD

Mean

SD

Mean

SD

Mean

SD

Mean

SD

Sensitivity

0.588

0.247

0.852

0.137

0.746

0.117

0.675

0.156

0.865

0.103

Specificity

0.965

0.052

0.859

0.105

0.710

0.152

0.616

0.256

0.848

0.088

Accuracy

0.776

0.122

0.856

0.103

0.728

0.123

0.645

0.153

0.856

0.091

AUC

0.783

0.124

0.829

0.116

0.726

0.136

0.607

0.154

0.852

0.095

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BMC Genomics

ISSN: 1471-2164

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