Table 1 Definition of proteins clusters.
Protein clusters | Description | Reference |
|---|---|---|
COG | Clusters of orthologous groups in 26 or 66 microorganisms* | |
KOG | Clusters of orthologous groups in 7 eukaryotic organisms* | [24] |
arCOG | Clusters of orthologous groups in 41 or 70 archaeal microorganisms | [28] |
HOG | Clusters of orthologous groups in 13 haloarchaeal microorganisms | This work |
cHOG | Conserved orthologous groups in all 13 haloarchaeal microorganisms | This work |
aHOG | HOGs not conserved in all 13 haloarchaeal microorganisms | This work |
ucHOG | cHOGs not associated with any COGs or KOGs | This work |
tucHOG | ucHOGs that do not have any homologs among any other proteins | This work |
nucHOG | ucHOGs that have 1 or more non-haloarchaeal homologs | This work |