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Table 4 Homology of E. histolytica snoRNAs and modification sites with selected organisms

From: Computational prediction and validation of C/D, H/ACA and Eh_U3 snoRNAs of Entamoeba histolytica

snoRNA genes of E. histolytica Modification Homology Conservation of sites
Yeast Human P. falciparum T. brucei
Me-Eh-SSU-G1296 SSU-G1296 snR40 U232A - TB9Cs3C1 YHT
18SG1271 18SG 1328   SSU Gm1676
Me-Eh-SSU-A431 SSU-A431 snR87 U16 PFS11 - YHP
18SA 436 18SA 484 18S Am442  
Me-Eh-SSU-G1535 SSU-G1535 snR56 U25 snoR25 TB9Cs2C4 YHPT
18SG 1428 18SG G1674SSU SSU Gm1895
Me-Eh-SSU-A27 SSU-A27 snR74 U27 PFS4 TB8Cs2C1 YHPT
18SA 28 27 18S Am28 SSU Am56
Me-Eh-SSU-G1152 SSU-G1152 snR41 - - - Y
18SG 1126    
Me-Eh-SSU-A790 SSU-A790 snR53 - - - Y
18SA 796    
Me-Eh-SSU-C1805 SSU-C1805 snR70 U43 - TB10Cs4C3 YHT
18SC 1639 18SC 1703   SSU Um2123
Me-Eh-LSU-A928a LSU-A928 snR39 U32A - TB11Cs4C2 YHT
28SA 807 28SA 1511   LSU5 Am1091
Me-Eh-LSU-A785 LSU-A785 U18 U18A PFS13 TB10Cs2C2 YHPT
28SA 649 28SA 1313 28S Am728 LSU Am910
Me-Eh-LSU-G2958 LSU-G2958 snR38 snR38A PFS7 TB11Cs1C2 YHPT
28SG 2815 28SG 4362 28S Gm3176 LSU3Gm1207
Me-Eh-LSU-A3089 LSU-A3089 snR71 U29 PFS2 - YHP
28SA 2946 28SA 4493 18S A1129,28SAm3307  
Me-Eh-LSU-C2414 LSU-C2414 snR64 U74 PFS15, PFS16 TB10Cs1C1 YHPT
28SC 2337 28SC 3820 28S Cm2632 LSU3 Cm538
Me-Eh-LSU-G926 LSU-G926 snR39b snR39B PFS8 TB9Cs2C3 YHPT
28SG805 28SG1509 18SGm1798,28SGm926 LSU5Gm1089
Me-Eh-LSU-U1018 LSU-U1018 snR40 - - - Y
28SU 898    
Me-Eh-LSU-G1028 LSU-G1028 snR60 U80 - TB9Cs2C5 YHT
28SG 908 28SG 1612   LSU5Gm1192
Me-Eh-LSU-A2333 LSU-A2333 - - PFS14 - P
   28S Am2551  
ACA-Eh-SSU1315 SSU1315 snR83 ACA4 Pfa ACA 40 - YHP
18SU 1290 18SU 1347 SSU1391,1443  
ACA-Eh-SSU626 SSU626 snR161 unknown - - YH
18SU 632 18SU 681   
ACA-Eh-SSU461 SSU461 snR189 - - - Y
18SU 466    
ACA-Eh-LSU3008 LSU3008 snR46 ACA16 Pfa ACA 41 - YHP
28SU 2865 28SU 4412 LSU3226,3399  
ACA-Eh-LSU1172a LSU1172 snR81 ACA7 - - YH
28SU 1052 28SU 1779   
ACA-Eh-LSU1172b LSU1172 snR81 ACA7 - - YH
28SU 1052 28SU 1779   
ACA-Eh-LSU3087 LSU3087 snR37 ACA10 Pfa ACA 32 TB9Cs2H2 YHPT
28SU 2499 28SU 4491 LSU3305,3478 LSU3psi1336
ACA-Eh-LSU1159a LSU1159 - HBI-115 -  - H
  28SU 1766   
ACA-Eh-LSU2700 LSU1159 - HBI-115 -  - H
  28SU 1766   
ACA-Eh-LSU1080 LSU1080 snR8 ACA56 - - YH
28SU 960 28SU 1664   
ACA-Eh-LSU2997b LSU2997 - ACA21 -  - H
  28SU 4401   
ACA-Eh-LSU1123 LSU1123 snR5 ACA52 - - YH
28sU 1004 28sU 1731   
ACA-Eh-LSU2288 LSU2288 - ACA27 -  - H
  28sU 3694   
ACA-Eh-LSU1159b LSU1159 - HBI-115 -  - H
  28sU 1766   
ACA-Eh-LSU2997a LSU2997 - ACA21 - -  H
  28sU 4401   
ACA-Eh-5.8S80b 5.8S80b Pus7p U69 - - YH
5sU 50 5.8sU 69   
ACA-Eh-SSU1216 SSU1216 snR35 ACA13 - - YH
18sU 1191 18sU 1248   
ACA-Eh-SSU299 SSU299 snR49 - - - Y
18sU 302    
ACA-Eh-SSU1212 SSU1212 snR36 ACA36/36B - - YH
18sU 1187 18sU 1244   
ACA-Eh-LSU2335 LSU2335 snR191 U19/19-2 Pfa ACA 35   YHP
28sU 2258 28sU 3741 LSU2553,2676  
ACA-Eh-LSU2268 LSU2268 snR32 unknown - TB10Cs3H2 YHT
   28sU 2191 28sU 3674   LSU3psi397  
  1. Note: snoRNA of E. histolytica and its homolog in yeast (Y), Human (H), P. falciparum (P) and T. brucei (T) is shown with their conserved modification sites.