Table 1 Alignment statistics for the individuals from different turkey populations
From: Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo)
IDs | Sequence coverage (fold)1 | Assembly coverage (%)2 | Assembly coverage 1-25X (%)3 |
|---|---|---|---|
L1a | 5.12 | 79.04 | 78.93 |
L1b | 4.72 | 83.88 | 84.04 |
L1c | 5.61 | 84.10 | 83.85 |
L2a | 6.54 | 85.91 | 85.85 |
L2b | 6.72 | 86.19 | 86.13 |
L2c | 5.18 | 80.16 | 80.05 |
L3a | 6.32 | 85.98 | 85.68 |
L3b | 5.75 | 85.26 | 85.21 |
L3c | 6.24 | 85.91 | 85.72 |
L4a | 6.19 | 85.58 | 85.51 |
L4b | 5.75 | 84.65 | 84.58 |
L4c | 5.13 | 84.14 | 84.12 |
L5a | 3.52 | 71.18 | 71.14 |
L5b | 5.18 | 71.35 | 71.27 |
L5c | 5.73 | 68.35 | 68.08 |
L6a | 2.88 | 65.14 | 65.13 |
L6b | 4.50 | 77.53 | 77.49 |
L6c | 4.52 | 81.45 | 81.43 |
L7a | 5.46 | 78.59 | 78.39 |
L7b | 4.61 | 57.86 | 57.70 |
L7c | 4.99 | 70.88 | 70.78 |
BvSW1 | 4.55 | 83.21 | 83.19 |
BvSW2 | 5.72 | 48.33 | 47.48 |
BvSW3 | 5.59 | 82.24 | 82.13 |
Nset1 | 2.07 | 53.84 | 53.82 |
Nset2 | 5.39 | 83.94 | 83.86 |
Nset3 | 5.17 | 79.42 | 79.29 |
RP1 | 5.31 | 60.31 | 60.05 |
RP2 | 5.00 | 63.54 | 63.43 |
SM1 | 1.81 | 47.10 | 47.06 |
SM2 | 1.38 | 29.32 | 29.30 |
SM3 | 1.73 | 45.41 | 45.40 |