Whole genome SNP discovery and analysis of genetic diversity in Turkey (Meleagris gallopavo)

BMC Genomics

Table 3 Discovered segregating, and the fixed number of SNPs along with the observed heterozygosity Kb ^-1 in each turkey population

Population ID	Segregating SNPs¹	Fixed SNPs²	Heterozygosity Kb^-1
L1	1,563,553	617,893	1.07
L2	1,504,682	781,352	0.94
L3	1,589,525	502,807	1.01
L4	1,441,173	709,507	0.88
L5	950,425	674,038	1.06
L6	1,139,459	613,069	1.00
L7	1,097,788	673,807	1.07
BvSW	926,733	1,047,010	0.73
Nset	1,194,570	708,773	1.23
RP	883,602	813,164	1.12
SM	120,305	552,032	1.64

¹ The total number of SNPs detected compared to the reference genome in which the non-reference allele is segregating in a population. ² The total number of SNPs detected compared to the reference genome in which only the non-reference allele is found in a population.

ISSN: 1471-2164