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Table 8 Statistic of transcripts aligned to the draft diploid Ae . tauschii genome

From: Optimizing de novo common wheat transcriptome assembly using short-read RNA-Seq data

  Trinity Trans-ABySS Public ESTs Trinity_AFSFASSS_2nd
  AFSFASSS AFSF + ASSS AF + SF + AS + SS AFSFASSS AFSF + ASSS AF + SF + AS + SS   
Mean coverage 1.9 2.2 2.3 2 2.1 2.1 11.0 2.9
Coverage range 1 - 279 1 - 339 1 - 254 1 - 26 1 - 24 1 - 24 1 - 10,122 1 - 658
Bases covered 62,103,048 58,923,609 56,105,411 51,499,767 45,678,989 41,571,199 46,506,263 63,042,809
  1. Assembled transcripts were aligned to the draft genomic sequence. For the covered regions of the reference by assembled transcripts, mean coverage indicated how many transcripts covered on average for a certain region.