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Table 1 Summary of small RNA library sequencing

From: Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel

  Library
  B. pahangi L3 B. pahangi adult H. contortus L3 H. contortus adult
Raw reads 13242069 13164896 5198711 12226463
Unique mapped sequences 268717 424849 244003 748568
Total mapped reads 3853899 8196608 3644275 5666474
Percentage mapped 29.1% 62.3% 70.1% 46.3%
tRNA 164815 314999 44469 161537
rRNA 463942 567695 1774431 1826279
Repeat a 22 305 - -
miRNA (mature) 2359229 5729861 1193015 1412260
miRNA (star) 16560 115880 2862 8811
cds/exon (sense) 263828 294245 227319 266308
cds/exon (antisense) 140829 391339 283917 271624
piRNA b (44) (49) (15) 1296
Other 444630 782235 118247 1718359
  1. a Not analysed for H. contortus.
  2. b Only the H. contortus adult sequences are likely to represent genuine piRNAs.