Skip to main content

Table 2 Representative genes significantly up- and down-regulated in roots of cowpea cultivar B301 6 days post-inoculation with S. gesnerioides race SG3

From: Global changes in gene expression during compatible and incompatible interactions of cowpea (Vigna unguiculata L.) with the root parasitic angiosperm Striga gesnerioides

Category Sequence ID Annotation Fold change P- value
Transcription factors 33693912 POZ/BTB containing-protein AtPOB1 5.57 0.003
  33693491 asymmetric leaves 1, phantastica (AS1) 5.25 0.027
  33670861 zinc finger (RING-H2 type) protein-related 4.8 0.003
  33684347 basic helix-loop-helix (bHLH) DNA-binding 3.27 0.019
Secondary metabolism 33658828 chalcone synthase 2.03 0.050
Signal transduction 33685813 serine carboxypeptidase-like 23 (scpl23) 12.75 0.000
  33673870 5'-AMP-activated protein kinase beta-2 subunit 3.57 0.040
  33649427 cytochrome P450 (CYP722A1) 2.57 0.006
  33684072 CDKE1 (Cyclin-dependent kinase E1) 2.41 0.016
Cellular transport 33666738 aluminum activated malate transporter 17.62 0.006
  33676680 folate transporter 1 (FOLT1) 4.15 0.036
Defense related 33646015 chitinase 1 precursor, narbonin 44.57 0.000
  33690846 cationic peroxidase 1 precursor 5.18 0.005
  33662461* class III peroxidase 3.83 0.004
  33663803 class III peroxidase 3.71 0.039
  33663380 beta galactosidase7 (BGAL7) 3.13 0.048
  33651959 1,3-beta-D-glucanase 2.84 0.007
  33680262 disease resistance protein (TIR-NBS-LRR class) family 1.91 0.015
Plant growth regulators 33646791 jasmonate-zim domain protein 1 (JAZ1) 2.23 0.039
Cell component 33692312 copper ion-binding laccase 4.41 0.039
  33677650 laccase 3.8 0.042
  33686210 pectin methylesterase 3.24 0.011
Unknown protein 33675717 unnamed protein product 12.86 0.023
  33657146 unnamed protein product 4.78 0.040
Unknown protein 33684891 expressed protein contains Pfam profile PF03140 -8.83 0.000
  33657530 expressed unknown protein -4.52 0.037
Metabolism 33686080 C2 domain-containing protein similar to phloem protein -6.54 0.000
  33681048 ferric reductase -4.39 0.009
Transcription 33667792 aluminum-activated malate transporter -4.9 0.036
Cell cycle, DNA processing 33677672 RAD51A recombination protein -4.52 0.042
  1. *genes verified by qRT PCR.
\