Table 3 Representative genes significantly up- and down-regulated in roots of cowpea cultivar B301 13 days post-inoculation with S. gesnerioides race SG3
Categories | Sequence ID | Annotation | Fold change | P value |
|---|---|---|---|---|
Transcription factors | 33693912 | POZ/BTB containing-protein AtPOB1 | 6.04 | 0.000 |
| Â | 33646298 | chlorophyll a/b-binding protein CP24 precursor | 5.2 | 0.012 |
| Â | 33693491* | asymmetric leaves 1 (AS1), phantastica | 4.57 | 0.000 |
| Â | 33683206 | growth regulating factor 4 (GRF4) | 4.53 | 0.006 |
| Â | 33654115 | ethylene responsive element 3 (ERF3) | 4.08 | 0.010 |
| Â | 33681428* | RING-H2 finger protein | 2.91 | 0.006 |
Energy | 33666738 | ALMT1 (Aluminum activate malate transporter) | 19.62 | 0.001 |
| Â | 33676680 | folate transporter 1 (FOLT1) | 4.23 | 0.005 |
| Â | 33679899 | ABC transporter-like protein | 2.85 | 0.047 |
Cellular transduction | 33675942* | Ser/Thr protein kinase | 10.98 | 0.015 |
| Â | 33668608 | Leucine-rich repeat protein kinase family | 6.62 | 0.002 |
| Â | 33684252 | FU (FUSED); protein serine/threonine kinase | 3.97 | 0.023 |
| Â | 33647807 | serine/arginine rich protein | 3.18 | 0.027 |
| Â | 33671868 | receptor-like protein kinase 2 | 3.04 | 0.001 |
Defense | 33646015 | chitinase 1 precursor, narbonin | 6.06 | 0.000 |
| Â | 33663380 | beta-galactosidase | 4.21 | 0.003 |
| Â | 33667640 | disease resistance protein RPM1 | 2.15 | 0.044 |
Development | 33668608 | leaf senescence-associated receptor kinase | 6.62 | 0.001 |
| Â | 33653025 | auxin-regulated protein | 3.67 | 0.008 |
| Â | 33645492 | ripening related protein (MLP43) | 3.05 | 0.014 |
Cellular component | 33686210 | pectin methylesterase | 3.29 | 0.002 |
|  | 33650922 | 4-coumarate – CoA-lipase | 3.23 | 0.030 |
Unknown protein | 33675717 | unnamed protein product | 4.27 | 0.050 |
| Â | 33658803 | hypothetical protein | 3.71 | 0.015 |
Unknown protein | 33669403 | predicted protein | -12.21 | 0.001 |
| Â | 33684891 | hypothetical protein | -10.8 | 0.000 |
| Â | 33691084 | predicted protein | -8.36 | 0.000 |
| Â | 33660796 | predicted protein | -7.24 | 0.001 |
Cellular transport | 33672142 | nodulin MtN21 family protein | -11.55 | 0.000 |
| Â | 33657530 | early nodulin 55-2 precursor | -7.55 | 0.006 |
| Â | 33689578 | oligopeptide transporter OPT family | -7.24 | 0.004 |