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Table 1 Variation in vomeronasal receptor genes identified by massively parallel sequencing

From: Genomic variation in the vomeronasal receptor gene repertoires of inbred mice

   DNA sequence SNPs
Strain VRs after parsing Resolved sequence (in Kb) Unresolved sequence % All SNPs Non-synonymous SNPs (%) Private SNPs (%) Truncating
C57BL/6NJ 203 316.936 215.204 (40.4) 1 1 (100) 1 (100) 0 (0.00)
129S1/SvImJ 200 314.377 217.763 (40.9) 418 238 (56.9) 3 (0.72) 2 (0.84)
129S5SvEvBrd 201 312.532 219.608 (41.3) 396 224 (56.6) 1 (0.25) 2 (0.89)
129P2/Ola 202 315.127 217.013 (40.8) 416 231 (55.5) 24 (5.77) 4 (1.73)
A/J 200 307.621 224.519 (42.2) 318 191 (60.1) 36 (11.3) 4 (2.09)
AKR/J 200 309.55 222.59 (41.8) 311 170 (54.7) 7 (2.25) 4 (2.35)
BALB/cJ 202 315.94 216.2 (40.6) 301 184 (61.1) 1 (0.33) 4 (2.17)
C3H/HeJ 202 314.41 217.73 (40.9) 216 122 (56.5) 0 (0.00) 2 (1.64)
CBA/J 203 316.936 215.204 (40.4) 249 144 (57.8) 3 (1.20) 2 (1.39)
DBA/2J 201 311.824 220.316 (41.4) 370 216 (58.4) 22 (5.95) 2 (0.93)
LP/J 202 314.371 217.769 (40.9) 521 289 (55.5) 11 (2.11) 3 (1.04)
NOD/ShiLtJ 200 314.167 217.973 (41.0) 333 187 (56.2) 11 (3.30) 2 (1.07)
NZO/HILtJ 199 313.186 218.954 (41.2) 565 333 (58.9) 36 (6.37) 7 (2.10)
Lab-derived 2615 4076.977 2840.843 (41.1) 4415 2530 (57.3) 156 (3.53) 38 (1.50)
PWK/PhJ 194 298.987 233.153 (43.8) 1409 789 (56.0) 508 (36.0) 6 (0.76)
CAST/EiJ 183 280.912 251.228 (47.2) 1402 808 (57.6) 571 (40.7) 8 (0.99)
WSB/EiJ 202 314.389 217.751 (40.9) 462 291 (63.0) 84 (18.2) 4 (1.37)
SPRET/EiJ 172 265.669 266.471 (50.1) 3519 1976 (56.2) 2619 (74.4) 20 (1.01)
Wild-derived 751 1159.957 968.603 (45.5) 6792 3864 (56.9) 3782 (55.7) 38 (0.98)
Total 3,366 5,236.93 3,809.45 (42.1) 11,207 6,394 (57.1) 3,938 (35.2) 76 (1.19)