Figure 8
From: An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies
Genome plots of negative 10log-transformed enrichment p-values, for the HOXA cluster on human chromosome 7 (top) and the Dlk1-Gtl2 cluster on mouse chromosome 12 (bottom). Red vertical lines are given at values corresponding to p-values of 0.05 (top line) and 0.20 (bottom line). Regions with values above the top line are highly enriched, while values between the lines are a sign of moderate enrichment. The total number of identified enriched regions are reported in the legend. TBW = Tukey's biweight scaling, Q = quantile normalization, TQ = T-quantile normalization.