miRNA | miR sequence (5'→3') | miR length (nt) | Reads | Precursor from EST | Mature miRNA position | Stem-loop position | ||
---|---|---|---|---|---|---|---|---|
 | miR start | miR end | Precursor start | Precursor end | ||||
Bna-miRC1 | CCATACTAAATCTGGATCATTT | 22 | 115 | CU943501 | 519 | 540 | 519 | 634 |
Bna-miRC2 | ATAAATCCCAAGCATCATCCA | 21 | 1011 | EV202910 | 179 | 199 | 173 | 261 |
Bna-miRC3 | TGGGATTGGCTTTGGGCTTTTC | 22 | 12 | CU940792 | 108 | 129 | 82 | 281 |
Bna-miRC4 | TTTCAGTCGTCATAGGTTAGT | 21 | 11 | GT084890 | 55 | 75 | 51 | 158 |
Bna-miRC5-1 | TGTGTTGTGATGATAATCCGA | 21 | 306 | CU971106 | 285 | 305 | 132 | 350 |
Bna-miRC5-1* | AATCGGATTATCATCACAACA | 21 | 7 | CU971106 | 93 | 113 | 29 | 291 |
Bna-miRC5-2 | TCAACCAAATACACATTGTGG | 21 | 4 | CU971106 | 52 | 72 | 35 | 306 |
Bna-miRC5-3 | TTATCATCACAACACTAGATC | 21 | 536 | CU971106 | 76 | 96 | 19 | 281 |
Bna-miRC5-3* | TCTTGTGTTGTGATGATAATC | 21 | 216 | CU971106 | 288 | 308 | 136 | 349 |
Bna-miRC5-4 | TGATAATCCGACTTCTATGAC | 21 | 29 | CU971106 | 272 | 292 | 122 | 356 |
Bna-miRC5-5 | TTGGTTTGGATCTTGGAAATC | 21 | 8 | CU971106 | 123 | 143 | 42 | 304 |
Bna-miRC5-6 | TCGGATTATCATCACAACACT | 21 | 182 | CU971106 | 89 | 109 | 27 | 289 |
Bna-miRC6 | ATAGATCCTTCTGATGACGCA | 21 | 16 | DU099814 | 306 | 326 | 254 | 327 |
Bna-miRC7 | CAAATCCTGTCATCCCTACCA | 21 | 89 | GT079632 | 102 | 122 | 102 | 229 |
Bna-miRC8 | CAGGAGAGATTGTTGGATCCA | 21 | 3 | CU931338 | 337 | 357 | 337 | 443 |
Bna-miRC9 | TGCCTGGCTCCCTGTATACCA | 21 | 118 | EV193539 | 387 | 407 | 380 | 474 |
Bna-miRC10 | TCAATGTTGGCTCAATTATGT | 21 | 12 | CU934632 | 731 | 751 | 666 | 751 |
Bna-miRC11 | GGCGAGTCACCGGTGTCGGTC | 21 | 6 | FP328714 | 415 | 435 | 406 | 534 |
Bna-miRC12 | GGGTCGATATGAGAACACATG | 21 | 15 | EE426846 | 15 | 35 | 1 | 123 |
Bna-miRC13 | ACCCTGTTGAGCTTGTCTCTA | 21 | 3 | CU980942 | 490 | 510 | 449 | 524 |
Bna-miRC14 | CAGCTGGACGACTTAGTAGAC | 21 | 7 | CU943399 | 123 | 143 | 103 | 229 |
Bna-miRC15-1 | ACATTGGACTACATATATTAC | 21 | 8 | ES901619 | 392 | 412 | 299 | 430 |
Bna-miRC15-2 | TCAATACATTGGACTACATAT | 21 | 9 | ES901619 | 387 | 407 | 299 | 430 |
Bna-miRC16 | GTTTTGAGAGATTGGGAAGCT | 21 | 3 | EV146378 | 77 | 97 | 58 | 216 |
Bna-miRC17a-1 | TTTCCAAATGTAGACAAAGCA | 21 | 7132 | ES913560 | 96 | 116 | 31 | 137 |
Bna-miRC17a-1* | CTTTGTCTATCGTTTGGAAAAG | 22 | 782 | ES913560 | 53 | 74 | 31 | 137 |
Bna-miRC18 | TCGCGATCTTAGATCCTCTAA | 21 | 41 | EV179238 | 441 | 461 | 288 | 564 |
Bna-miRC19 | CGAGTTGGTCGGGAAAGACGG | 21 | 12 | DU102764 | 104 | 124 | 35 | 128 |
Bna-miRC20 | CTCTCGTGGAGCGTCTCGAGG | 21 | 3 | EV192419 | 700 | 720 | 567 | 746 |
Bna-miRC21 | GGAGGCAGCGGTTGATCGATC | 21 | 7 | DY025212 | 429 | 449 | 420 | 523 |
Bna-miRC22a-1 | CAAGTAGACGACTTTCCAGAC | 21 | 10 | CU945922 | 359 | 379 | 298 | 403 |
Bna-miRC22a-2 | CGTGGTCGTCCAAGTAGACGA | 21 | 13 | CU945922 | 363 | 383 | 292 | 397 |
Bna-miRC22a-3 | TTGGACGACTTTGTAGACGAC | 21 | 9 | CU945922 | 303 | 323 | 297 | 402 |
Bna-miRC23a-1 | TCAGAACCAAACCCAGAACAAG | 22 | 54 | CU958057 | 25 | 46 | 3 | 241 |
Bna-miRC23a-2 | TTACAGAACAGCAACAAGCTGT | 22 | 150 | CU958057 | 47 | 68 | 7 | 238 |
Bna-miRC23a-3 | TATCTACTGCTTATGCCACCA | 21 | 65 | CU958057 | 54 | 74 | 1 | 215 |
Bna-miRC23a-3* | GATGCATAACCACTAGATACG | 21 | 8 | CU958057 | 140 | 160 | 1 | 215 |
Bna-miRC24 | TTAGGATTGAGATCTTAGCGA | 21 | 7 | EV176533 | 225 | 245 | 214 | 395 |
Bna-miRC25 | TTGGACTGAAGGGAACTCCCT | 21 | 23719 | FP023833 | 319 | 339 | 168 | 343 |
Bna-miRC25* | AGAGTTTCCTTAAGTCCATTC | 21 | 34 | FP023833 | 173 | 193 | 167 | 343 |
Bna-miRC26 | TGAGCCAAAGATGACTTGTCG | 21 | 45 | BZ021311 | 68 | 88 | 66 | 323 |
Bna-miRC27 | TAAGATGATGGAACACTGGCC | 21 | 25 | EE438385 | 18 | 38 | 14 | 279 |
Bna-miRC28 | ATGGATCCGCCGGATAAGGAT | 21 | 6 | CU965419 | 466 | 486 | 350 | 511 |
Bna-miRC29 | TTGAGGTTTTGAGGACTGGCC | 21 | 6 | EV093069 | 644 | 664 | 564 | 668 |
Bna-miRC30 | TCCTGGACGACTTTCAAGTAAG | 22 | 9 | CZ888137 | 161 | 182 | 20 | 250 |
Bna-miRC31 | AGATCATCCTGCGGCTTCATT | 21 | 26 | EV134163 | 290 | 310 | 233 | 335 |
Bna-miRC32 | GCAAGTTGACTTTGGCTCCGT | 21 | 51 | BZ021311 | 52 | 72 | 13 | 184 |
Bna-miRC33 | TTTTGCCTACTCCTCCCATACC | 22 | 268 | CU981257 | 103 | 124 | 95 | 223 |
Bna-miRC34 | ATCCTCGGGACACAGATTACC | 21 | 113 | EV076017 | 357 | 377 | 339 | 459 |
Bna-miRC35 | ATGGTGTAGGTACTGAGCAGA | 21 | 13 | EV194620 | 298 | 318 | 294 | 400 |
Bna-miRC36 | CGTCCGGGGAAAGCAAAGTCG | 21 | 11 | EV088144 | 141 | 161 | 64 | 186 |
Bna-miRC37 | TGATTTATCCAAGGGTTCAGG | 21 | 31 | DU101557 | 509 | 529 | 367 | 608 |
Bna-miRC38 | CAAGTAGACTACTTTCCAGACG | 22 | 9 | GT084321 | 52 | 73 | 1 | 92 |
Bna-miRC39 | TAAGATGATGGGACGTTGGATC | 22 | 11 | DY002174 | 42 | 63 | 40 | 306 |
Bna-miRC40 | CGCTCACAGCATCTGAACTCT | 21 | 21 | CD842549 | 99 | 119 | 78 | 243 |
Bna-miRC41 | TTTTGGAGAAGGCTGTAGGCA | 21 | 13 | DU109430 | 791 | 811 | 780 | 890 |
Bna-miRC42 | TTCCCCGGACGACTTTAAATT | 21 | 15 | EV088144 | 90 | 110 | 3 | 125 |
Bna-miRC43 | TGTGAATGATGCGGGAGATGT | 21 | 15 | CN829704 | 219 | 239 | 69 | 315 |
Bna-miRC44 | TTGGCCACAACGGATTTAACA | 21 | 9 | EV006438 | 66 | 86 | 66 | 141 |
Bna-miRC45 | TTTCATCTTAGAGAATGTTGTC | 22 | 42 | EV178795 | 578 | 599 | 478 | 617 |
Bna-miRC46 | ACTTGTCTCACTCATCAGTT | 20 | 7 | EV063926 | 5 | 24 | 3 | 215 |
Bna-miRC47 | CAAATGTAGACAAAGCAAAAC | 21 | 4 | ES913560 | 100 | 120 | 31 | 137 |