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Table 1 QTL from Conrad against Phytophthora sojae mapped using the F 6:8 Conrad × Sloan population

From: Dissection of two soybean QTL conferring partial resistance to Phytophthora sojae through sequence and gene expression analysis

QTLa

IM

CIM

Markerb

Selected lines for qRT-PCRc

 

LOD

Exp. Var. (%)

LOD

Exp. Var. (%)

 

R

2022

1960

1974

1854

S

19-1

6.0

11.8

3.5

4.8

BARC-047496-12943

+

+

+

-

-

-

     

Satt527

+

+

+

-

-

-

     

Glyma19g35340

+

+

+

-

-

-

     

GML_OSU10d

+

+

+

-

-

-

     

BARCSOYSSR_19_1243

+

+

+

-

-

-

19-2

9.4

18.1

7.9

11.9

Glyma19g40800

+

+

+

-

-

-

     

BARCSOYSSR_19_1452d

+

+

+

-

-

-

     

Glyma19g40940

+

+

+

-

-

-

     

Glyma19g41210

+

+

+

-

-

-

     

Glyma19g41390

+

+

+

-

-

-

     

BARCSOYSSR_19_1473

+

+

+

-

-

-

     

Glyma19g41580

+

+

+

-

-

-

     

Glyma19g41780

+

+

+

-

-

-

     

Glyma19g41800

+

+

+

-

-

-

     

Glyma19g41870

+

+

+

-

-

-

     

Glyma19g41900

+

+

+

-

-

-

     

Glyma19g42120

+

+

+

-

-

-

     

Glyma19g42200

+

+

+

-

-

-

     

Glyma19g42220

+

+

+

-

-

-

     

Glyma19g42240

+

+

+

-

-

-

     

Glyma19g42340

+

+

+

-

-

-

     

Glyma19g42390

+

+

+

-

-

-

     

BARC-039977-07624

+

+

+

-

-

-

1

3.1

6.0

3.7

5.0

BARC-060037-16311

+

+

-

+

-

-

     

BARC-064441-18673d

+

+

-

+

-

-

     

BARC-054071-12319

+

+

-

+

-

-

18-1

5.3

11.7

4.5

6.1

BARCSOYSSR_18_1707d

+

-

-

+

+

-

     

BARCSOYSSR_18_1710

+

-

-

+

+

-

18-2

10.5

19.6

8.4

9.3

BARCSOYSSR_18_1777

+

-

-

+

+

-

     

BARC-057845-14952

+

-

-

+

+

-

     

BARC-039397-07314d

+

-

-

+

+

-

     

BARCSOYSSR_18_1949

+

-

-

+

+

-

  1. The QTL presence in the six selected lines for qRT-PCR is also shown.
  2. a QTL were presented as chromosome number, followed by the serial number if there were more than one on the same chromosome;
  3. b Markers tested in each QTL interval: markers started with ‘BARC’ or ‘Sat’ are from the public databases (Choi et al., 2007; Hyten et al., 2010; Song et al., 2010), and markers started with ‘Glyma’ are the PAMSA markers designed in this study;
  4. c Conrad (R) alleles for each marker were presented as “+” in the selected lines for qRT-PCR, while “-” referred to the Sloan (S) alleles;
  5. d Nearest marker under each QTL interval.