Table 2 Intestine transcripts corresponding to the top 100 most significant features exhibiting differential expression between family groups
Accession no | Gene | Lean/Fat | p- value | |
|---|---|---|---|---|
| Â | Â | FO | VO | Â |
Metabolism (21%) | ||||
Lipid metabolism (5%) | ||||
CK874747 | Acylglycerol kinase | - 1.0 | - 1.1 | 0.0003 |
BI468033 | ATP-binding cassette sub-family A member 1 | - 1.1 | - 1.6 | 0.0004 |
Energy metabolism/generation of precursor metabolites (2%) | ||||
CK890974 | Mitochondrial calcium-dependent solute carrier SCaMC-2 | - 1.1 | - 1.6 | 0.0000 |
Protein and amino acid metabolism (12%) | ||||
EG647485 | Proteasome subunit beta type-8 precursor | - 1.3 | - 1.8 | 0.0000 |
DW591059 | Heat shock protein Hsp-16 | 1.2 | 1.4 | 0.0001 |
AJ425553 | 26S proteasome non-ATPase regulatory subunit 9 | - 1.2 | - 1.1 | 0.0002 |
DW592187 | 26 proteasome complex subunit DSS1 | 1.5 | 1.3 | 0.0008 |
CK878109 | Heat shock protein 60 kDa | 1.2 | 1.4 | 0.0009 |
Xenobiotic and oxidant metabolism (2%) | ||||
CO472279 | Cytochrome P450 1A | - 1.2 | - 1.5 | 0.0003 |
Transport/ intracellular trafficking (5%) | ||||
CK886307 | Peptide transporter PEPT2 | - 1.4 | - 1.3 | 0.0006 |
DW588251 | Post-GPI attachment to proteins factor 2 | 1.1 | 1.3 | 0.0007 |
Regulation of transcription (21%) | ||||
CK877881 | Forkhead box Q1 | - 1.4 | - 1.7 | 0.0000 |
CK884548 | Proline-rich nuclear receptor coactivator 2 | - 1.1 | - 1.2 | 0.0001 |
CK885013 | Forkhead box protein F1 | 1.1 | 1.5 | 0.0003 |
CK891975 | Y-box binding protein-2 | - 1.1 | - 1.1 | 0.0003 |
DW589341 | Signal transducer/activator of transcription Stat1 | - 1.2 | - 1.2 | 0.0004 |
CN181282 | Bromodomain containing protein 3 | - 1.1 | - 1.1 | 0.0007 |
CK884407 | C-Myc-binding protein | - 1.3 | - 1.1 | 0.0007 |
CK895950 | Transcription factor CP2-like | - 1.5 | - 1.2 | 0.0007 |
EG648473 | BTB/POZ domain-containing protein | - 1.1 | - 1.4 | 0.0009 |
Translation (7%) | ||||
CN181322 | 40S ribosomal protein S4 | 1.1 | 1.1 | 0.0002 |
CK885979 | Ribonuclease UK114 | - 1.1 | - 1.3 | 0.0005 |
EG648042 | Eukaryotic translation initiation factor 3, subunit J | 1.1 | 1.1 | 0.0009 |
Signalling/Signal transduction (16%) | ||||
CO471793 | Rho GDP-dissociation inhibitor 1 | 1.3 | 1.0 | 0.0000 |
CK885560 | Protein tyrosine phosphatase non-receptor type 9 | 1.3 | 1.5 | 0.0004 |
CK885079 | Sonic hedgehog-like protein | - 1.3 | - 1.0 | 0.0004 |
EG648038 | Kalirin, RhoGEF kinase | 1.2 | 1.2 | 0.0005 |
DW589610 | Chimaerin 1 | 1.2 | 1.2 | 0.0005 |
CK897590 | Growth factor receptor-bound protein 2 | 1.1 | 1.1 | 0.0009 |
EG647545 | Protein tyrosine phosphatase receptor type D | 1.0 | 1.2 | 0.0009 |
Structural proteins (25%) | ||||
CK882401 | Troponin C | - 1.1 | - 1.2 | 0.0000 |
CK889952 | Transgelin 2 | 1.5 | 1.7 | 0.0000 |
EG648135 | Osteonectin | 1.3 | 1.5 | 0.0000 |
CK899058 | Collagen alpha 3 type VI | 1.5 | 1.5 | 0.0002 |
CK879405 | Collagen alpha 2 type VI | 1.3 | 1.5 | 0.0002 |
EG649361 | Collagen alpha 2 type I | 1.5 | 1.7 | 0.0005 |
EG649013 | Collagen alpha 3 type I | 1.4 | 1.5 | 0.0005 |
mus_mfo_15A10 | Troponin-I isoform 3 | 1.4 | 1.6 | 0.0007 |
CK876833 | Keratocan | - 1.0 | 1.6 | 0.0007 |
DW590534 | Collagen alpha 2 type I | 1.5 | 1.6 | 0.0010 |
CK892271 | Collagen alpha 2 type V | 1.2 | 1.4 | 0.00010 |
CK873441 | Collagen alpha1 type VI | 1.2 | 1.4 | 0.0010 |
Immune response (5%) | ||||
AJ425527 | T-cell immunoglobulin and mucin domain-containing protein 4 | 1.1 | 1.1 | 0.0001 |
EG649194 | Mannose-binding protein C | 1.4 | 1.4 | 0.0003 |
Miscellaneous | ||||
AM041770 | Preimplantation protein 3 | - 1.3 | - 1.2 | 0.0000 |
EG649106 | Ornithine decarboxylase antizyme 2 | 1.4 | 1.1 | 0.0002 |
CK884355 | Guanylin precursor | 1.2 | 1.4 | 0.0002 |
CK879185 | Aminolevulinate, delta-, synthetase 1 | - 2.0 | - 1.1 | 0.0002 |
CK885814 | Similar to p53-associated parkin-like cytoplasmic protein | 1.2 | 1.1 | 0.0002 |
CK886214 | Septin-7 | 1.1 | 1.1 | 0.0003 |
BM414079 | Tumor protein D52-like 2 | - 1.1 | - 1.3 | 0.0003 |
BM413818 | Splicing factor, proline- and glutamine-rich | 1.2 | 1.2 | 0.0003 |
CK874550 | Follistatin-related protein 1 | 1.1 | 1.3 | 0.0004 |
DW589104 | Nucleoside diphosphate kinase 6 | 1.1 | 1.1 | 0.0005 |
DW592207 | Deoxyhypusine synthase | 1.5 | 1.6 | 0.0007 |
CK892359 | HCLS1-associated protein X-1 | - 1.2 | - 1.1 | 0.0007 |
BI468158 | Nuclear protein 1 | - 1.0 | - 1.6 | 0.0009 |
AJ425003 | Lamina-associated polypeptide 2 | 1.2 | 1.1 | 0.0010 |
CK899283 | Small EDRK-rich factor 2 | 1.3 | 1.5 | 0.0010 |
CK885090 | Claudin 15 | - 1.2 | - 1.1 | 0.0011 |