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Table 1 Primers used for semi-quantitative RT-PCR

From: Serpins in rice: protein sequence analysis, phylogeny and gene expression during development

Primer

Sequence

Amplicon size (bp)

OsSRP-QKG fwd

5′-TGCCCCGAGCCGCATTCTAC-3′

359

 rvs

5′-TTGCATCATAACCACGGCGG-3′

 

OsSRP-LGC fwd

5′-GACACCGGCCGCCTCTTCTC-3′

383

 rvs

5′-GCGCAGCCAAGGGTCATGAC-3′

 

OsSRP-LRS fwd

5′-AAGCTTCCATACCAGCAAGG-3′

395

 rvs

5′-GGAGCTGACCTAAGTGTGATC-3′

 

OsSRP-FRS fwd

5′-GCTTATGGCTTGACCACAAG-3′

451

 rvs

5′-CACTGCCTTCCATCACGTAG-3′

 

OsSRP-PTY fwd

5′-ACGACGGCCAGGTCCACTTC-3′

398

 rvs

5′-GCTATAGGTCGGGCTGCAAC-3′

 

OsSRP-PLP fwd

5′-AGCAAGGAAAGAATGAAAGG-3′

362

 rvs

5′-CAAGCCCATTGATACTGAAG-3′

 

OsSRP-FAS fwd

5′-GCTTGTGTGAGCGCGAGGAC-3′

399

 rvs

5′-GAAGGTAAGACAAACCGCGG-3′

 

OsSRP-FLC fwd

5′-GATGGTGGTGACATCACTCC-3′

423

 rvs

5′-CAAGAACTTCATCGTGCAGG-3′

 

Actin fwd

5′-TCCATCTTGGCATCTCTCAG-3′

418

 rvs

5′-GTACCCGCATCAGGCATCTG-3′

 
  1. BLASTN searches against the rice genome using the primers as query sequences were performed to check for the possibility of non-specific hybridisation. fwd = forward; rvs = reverse.