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Table 2 Effects of sequencing depth on FPR at different n and depths

From: Efficient experimental design and analysis strategies for the detection of differential expression using RNA-Sequencing

Depth n = 2 n = 3 n = 4 n = 6 n = 8 n = 12
25% 0.02 0.02 0.04 0.03 0.03 0.03
50% 0.03 0.03 0.04 0.05 0.04 0.03
75% 0.04 0.06 0.05 0.07 0.04 0.04
100% 0.04 0.06 0.06 0.06 0.05 0.04
  1. Effects of sequencing depth on FPR values for a subset of our tested depths = 25%, 50%, 75% & 100%.